Version 5.4
Mus musculus Gene: Atf5
Summary
InnateDB Gene IDBG-179716.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Atf5
Gene Name activating transcription factor 5
Synonyms AFTA; Atf7; Atfx; ODA-10
Species Mus musculus
Ensembl Gene ENSMUSG00000038539
Encoded Proteins
IDBP-179718
activating transcription factor 5
IDBP-265706
activating transcription factor 5
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000169136:
Gene Information
Type Protein coding
Genomic Location Chromosome 7:44812257-44816658
Strand Reverse strand
Band B3
Transcripts
ENSMUST00000047356 ENSMUSP00000047771
ENSMUST00000107893 ENSMUSP00000103525
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 2 experimentally validated interaction(s) in this database.
They are also associated with 15 interaction(s) predicted by orthology.
Experimentally validated
Total 2 [view]
Protein-Protein 2 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Predicted by orthology
Total 15 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0000977 RNA polymerase II regulatory region sequence-specific DNA binding
GO:0003700 sequence-specific DNA binding transcription factor activity
GO:0005515 protein binding
GO:0031072 heat shock protein binding
GO:0043565 sequence-specific DNA binding
Biological Process
GO:0006351 transcription, DNA-templated
GO:0006355 regulation of transcription, DNA-templated
GO:0006357 regulation of transcription from RNA polymerase II promoter
GO:0009791 post-embryonic development
GO:0010468 regulation of gene expression
GO:0021889 olfactory bulb interneuron differentiation
GO:0021891 olfactory bulb interneuron development
GO:0021988 olfactory lobe development
GO:0035264 multicellular organism growth
GO:0043066 negative regulation of apoptotic process
GO:0045944 positive regulation of transcription from RNA polymerase II promoter
GO:0048712 negative regulation of astrocyte differentiation
GO:0050768 negative regulation of neurogenesis
Cellular Component
GO:0005634 nucleus
GO:0005667 transcription factor complex
GO:0005737 cytoplasm
Orthologs
Species
Homo sapiens
Bos taurus
Gene ID
Gene Order
ENSG00000169136
View Gene Order
ENSBTAG00000003457
Not yet available
Pathway Predictions based on Human Orthology Data
NETPATH
REACTOME
KEGG
INOH
PID NCI
prlsignalingeventspathway
Signaling events mediated by PRL
Cross-References
SwissProt O70191
TrEMBL Q3TVK2 Q3UJF3
UniProt Splice Variant
Entrez Gene 107503
UniGene Mm.389890
RefSeq NM_030693
OMIM
CCDS CCDS21215
HPRD
IMGT
MGI ID MGI:2141857
MGI Symbol Atf5
EMBL AB012276 AF310624 AF312938 AF375475 AF375476 AK146479 AK160085 AY024362 AY115107 BC010195 BC092068 CH466603
GenPept AAG34160 AAH10195 AAH92068 AAK00584 AAK54640 AAK54641 AAL55820 AAM74470 BAA25313 BAE27202 BAE35616 EDL22753 EDL22754
RNA Seq Atlas 107503

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca