Version 5.4
Mus musculus Gene: Slc6a9
Summary
InnateDB Gene IDBG-179997.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Slc6a9
Gene Name solute carrier family 6 (neurotransmitter transporter, glycine), member 9
Synonyms Glyt-1; Glyt1
Species Mus musculus
Ensembl Gene ENSMUSG00000028542
Encoded Proteins
IDBP-179999
solute carrier family 6 (neurotransmitter transporter, glycine), member 9
IDBP-180005
solute carrier family 6 (neurotransmitter transporter, glycine), member 9
IDBP-543019
solute carrier family 6 (neurotransmitter transporter, glycine), member 9
IDBP-624408
solute carrier family 6 (neurotransmitter transporter, glycine), member 9
IDBP-624396
solute carrier family 6 (neurotransmitter transporter, glycine), member 9
IDBP-543021
solute carrier family 6 (neurotransmitter transporter, glycine), member 9
IDBP-624397
solute carrier family 6 (neurotransmitter transporter, glycine), member 9
IDBP-624404
solute carrier family 6 (neurotransmitter transporter, glycine), member 9
IDBP-624406
solute carrier family 6 (neurotransmitter transporter, glycine), member 9
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000196517:
Gene Information
Type Protein coding
Genomic Location Chromosome 4:117834506-117875198
Strand Forward strand
Band D2.1
Transcripts
ENSMUST00000063857 ENSMUSP00000066102
ENSMUST00000030269 ENSMUSP00000030269
ENSMUST00000151316 ENSMUSP00000118372
ENSMUST00000123994 ENSMUSP00000127806
ENSMUST00000149168 ENSMUSP00000129359
ENSMUST00000136476
ENSMUST00000132043 ENSMUSP00000122676
ENSMUST00000135769
ENSMUST00000169885 ENSMUSP00000127093
ENSMUST00000169990 ENSMUSP00000127203
ENSMUST00000163288 ENSMUSP00000127289
ENSMUST00000170733
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 0 experimentally validated interaction(s) in this database.
They are also associated with 2 interaction(s) predicted by orthology.
Predicted by orthology
Total 2 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0005283 sodium:amino acid symporter activity
GO:0005328 neurotransmitter:sodium symporter activity
GO:0005515 protein binding
GO:0015187 glycine transmembrane transporter activity
Biological Process
GO:0003333 amino acid transmembrane transport
GO:0006836 neurotransmitter transport
GO:0015816 glycine transport
Cellular Component
GO:0005886 plasma membrane
GO:0005887 integral component of plasma membrane
GO:0016021 integral component of membrane
Orthologs
Species
Homo sapiens
Bos taurus
Gene ID
Gene Order
ENSG00000196517
View Gene Order
ENSBTAG00000008690
Not yet available
Pathways
NETPATH
REACTOME
REACT_217615
Transport of glucose and other sugars, bile salts and organic acids, metal ions and amine compounds pathway
REACT_247550
SLC-mediated transmembrane transport pathway
REACT_253228
Na+/Cl- dependent neurotransmitter transporters pathway
REACT_253400
Transmembrane transport of small molecules pathway
KEGG
INOH
PID NCI
Pathway Predictions based on Human Orthology Data
NETPATH
REACTOME
REACT_20506
Na+/Cl- dependent neurotransmitter transporters pathway
REACT_19305
Transport of glucose and other sugars, bile salts and organic acids, metal ions and amine compounds pathway
REACT_15518
Transmembrane transport of small molecules pathway
REACT_19118
SLC-mediated transmembrane transport pathway
KEGG
INOH
PID NCI
Cross-References
SwissProt
TrEMBL
UniProt Splice Variant
Entrez Gene 14664
UniGene Mm.244549 Mm.488958
RefSeq NM_008135 XM_006502771
OMIM
CCDS CCDS18538
HPRD
IMGT
MGI ID MGI:95760
MGI Symbol Slc6a9
EMBL
GenPept
RNA Seq Atlas 14664

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca