Version 5.4
Homo sapiens Gene: SLC6A9
Summary
InnateDB Gene IDBG-97649.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol SLC6A9
Gene Name solute carrier family 6 (neurotransmitter transporter, glycine), member 9
Synonyms GLYT1
Species Homo sapiens
Ensembl Gene ENSG00000196517
Encoded Proteins
IDBP-97651
solute carrier family 6 (neurotransmitter transporter, glycine), member 9
IDBP-97655
solute carrier family 6 (neurotransmitter transporter, glycine), member 9
IDBP-97657
solute carrier family 6 (neurotransmitter transporter, glycine), member 9
IDBP-97659
solute carrier family 6 (neurotransmitter transporter, glycine), member 9
IDBP-97661
solute carrier family 6 (neurotransmitter transporter, glycine), member 9
IDBP-596212
solute carrier family 6 (neurotransmitter transporter, glycine), member 9
IDBP-588343
solute carrier family 6 (neurotransmitter transporter, glycine), member 9
IDBP-597712
solute carrier family 6 (neurotransmitter transporter, glycine), member 9
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary Currently no Entrez Summary Available. You might want to check the Summary Sections of the Orthologs.
Gene Information
Type Protein coding
Genomic Location Chromosome 1:43991500-44031467
Strand Reverse strand
Band p34.1
Transcripts
ENST00000372310 ENSP00000361384
ENST00000372307 ENSP00000361381
ENST00000372306 ENSP00000361380
ENST00000360584 ENSP00000353791
ENST00000357730 ENSP00000350362
ENST00000475075 ENSP00000434460
ENST00000492434
ENST00000489764
ENST00000466926 ENSP00000433241
ENST00000528803 ENSP00000435652
ENST00000533007
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 2 experimentally validated interaction(s) in this database.
Experimentally validated
Total 2 [view]
Protein-Protein 2 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Gene Ontology

Molecular Function
Accession GO Term
GO:0005283 sodium:amino acid symporter activity
GO:0005328 neurotransmitter:sodium symporter activity
GO:0005515 protein binding
GO:0015187 glycine transmembrane transporter activity
GO:0015375 glycine:sodium symporter activity
Biological Process
GO:0003333 amino acid transmembrane transport
GO:0006810 transport
GO:0006836 neurotransmitter transport
GO:0015816 glycine transport
GO:0055085 transmembrane transport
Cellular Component
GO:0005886 plasma membrane
GO:0005887 integral component of plasma membrane
GO:0016020 membrane
GO:0016021 integral component of membrane
Orthologs
Species
Mus musculus
Bos taurus
Gene ID
Gene Order
ENSMUSG00000028542
View Gene Order
ENSBTAG00000008690
Not yet available
Pathways
NETPATH
REACTOME
REACT_20506
Na+/Cl- dependent neurotransmitter transporters pathway
REACT_19305
Transport of glucose and other sugars, bile salts and organic acids, metal ions and amine compounds pathway
REACT_15518
Transmembrane transport of small molecules pathway
REACT_19118
SLC-mediated transmembrane transport pathway
KEGG
INOH
PID NCI
Cross-References
SwissProt
TrEMBL
UniProt Splice Variant
Entrez Gene
UniGene Hs.442590 Hs.742306
RefSeq NM_001024845 NM_001261380 NM_006934 NM_201649
HUGO
OMIM
CCDS CCDS30695 CCDS41316 CCDS41317
HPRD 03010
IMGT
EMBL
GenPept
RNA Seq Atlas

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca