Version 5.4
Mus musculus Gene: Shroom3
Summary
InnateDB Gene IDBG-180434.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Shroom3
Gene Name shroom family member 3
Synonyms AL022960; D5Ertd287e; Shrm; Shrm3
Species Mus musculus
Ensembl Gene ENSMUSG00000029381
Encoded Proteins
IDBP-254690
shroom family member 3
IDBP-254692
shroom family member 3
IDBP-254694
shroom family member 3
IDBP-625463
shroom family member 3
IDBP-625466
shroom family member 3
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000138771:
This gene encodes a PDZ-domain-containing protein that belongs to a family of Shroom-related proteins. This protein may be involved in regulating cell shape in certain tissues. A similar protein in mice is required for proper neurulation. [provided by RefSeq, Jan 2011]
Gene Information
Type Protein coding
Genomic Location Chromosome 5:92683435-92965318
Strand Forward strand
Band E2
Transcripts
ENSMUST00000113055 ENSMUSP00000108678
ENSMUST00000113054 ENSMUSP00000108677
ENSMUST00000113051 ENSMUSP00000108674
ENSMUST00000168878 ENSMUSP00000130419
ENSMUST00000172849
ENSMUST00000172706 ENSMUSP00000133690
ENSMUST00000172752
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 2 experimentally validated interaction(s) in this database.
They are also associated with 3 interaction(s) predicted by orthology.
Experimentally validated
Total 2 [view]
Protein-Protein 2 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Predicted by orthology
Total 3 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0003779 actin binding
GO:0005515 protein binding
Biological Process
GO:0000902 cell morphogenesis
GO:0001843 neural tube closure
GO:0002066 columnar/cuboidal epithelial cell development
GO:0007389 pattern specification process
GO:0008360 regulation of cell shape
GO:0030036 actin cytoskeleton organization
GO:0043482 cellular pigment accumulation
GO:0045176 apical protein localization
Cellular Component
GO:0005737 cytoplasm
GO:0005856 cytoskeleton
GO:0005874 microtubule
GO:0005912 adherens junction
GO:0016324 apical plasma membrane
GO:0043296 apical junction complex
GO:0045177 apical part of cell
Orthologs
Species
Homo sapiens
Bos taurus
Gene ID
Gene Order
ENSG00000138771
View Gene Order
ENSBTAG00000019633
Not yet available
Cross-References
SwissProt
TrEMBL
UniProt Splice Variant
Entrez Gene
UniGene Mm.412825 Mm.46014
RefSeq NM_001077595 NM_001077596 NM_015756 XM_006534965 XM_006534966 XM_006534967 XM_006534968
OMIM
CCDS CCDS39154 CCDS39155
HPRD
IMGT
MGI ID
MGI Symbol
EMBL
GenPept
RNA Seq Atlas

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca