Version 5.4
Mus musculus Gene: Alkbh5
Summary
InnateDB Gene IDBG-181248.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Alkbh5
Gene Name alkB, alkylation repair homolog 5 (E. coli)
Synonyms
Species Mus musculus
Ensembl Gene ENSMUSG00000042650
Encoded Proteins
IDBP-181250
alkB, alkylation repair homolog 5 (E. coli)
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000091542:
Gene Information
Type Protein coding
Genomic Location Chromosome 11:60536381-60558512
Strand Forward strand
Band B2
Transcripts
ENSMUST00000044250 ENSMUSP00000049116
ENSMUST00000134770
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 0 experimentally validated interaction(s) in this database.
They are also associated with 3 interaction(s) predicted by orthology.
Predicted by orthology
Total 3 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0016706 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors
GO:0035515 oxidative RNA demethylase activity
GO:0044822 poly(A) RNA binding
GO:0046872 metal ion binding
Biological Process
GO:0001666 response to hypoxia
GO:0006397 mRNA processing
GO:0006406 mRNA export from nucleus
GO:0007283 spermatogenesis
GO:0030154 cell differentiation
GO:0035553 oxidative single-stranded RNA demethylation
Cellular Component
GO:0005634 nucleus
GO:0016607 nuclear speck
Orthologs
Species
Homo sapiens
Bos taurus
Gene ID
Gene Order
ENSG00000091542
View Gene Order
ENSBTAG00000025046
Not yet available
Cross-References
SwissProt Q3TSG4
TrEMBL
UniProt Splice Variant
Entrez Gene 268420
UniGene Mm.262056 Mm.473040 Mm.473200
RefSeq NM_172943
OMIM
CCDS CCDS24794
HPRD
IMGT
MGI ID MGI:2144489
MGI Symbol Alkbh5
EMBL AK053695 AK053700 AK162072 AK163294 AL596386 BC052076
GenPept AAH52076 BAC35478 BAC35481 BAE36711 BAE37281 CAI35332
RNA Seq Atlas 268420

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca