Version 5.4
Bos taurus Gene: ALKBH5
Summary
InnateDB Gene IDBG-638066.3
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol ALKBH5
Gene Name probable alpha-ketoglutarate-dependent dioxygenase ABH5
Synonyms
Species Bos taurus
Ensembl Gene ENSBTAG00000025046
Encoded Proteins
IDBP-690114
Uncharacterized protein
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000091542:
Gene Information
Type Protein coding
Genomic Location Chromosome 19:35025249-35041293
Strand Reverse strand
Band
Transcripts
ENSBTAT00000034976 ENSBTAP00000034857
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 0 experimentally validated interaction(s) in this database.
They are also associated with 2 interaction(s) predicted by orthology.
Predicted by orthology
Total 2 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0016491 oxidoreductase activity
GO:0016706 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors
GO:0035515 oxidative RNA demethylase activity
GO:0044822 poly(A) RNA binding
GO:0046872 metal ion binding
GO:0051213 dioxygenase activity
Biological Process
GO:0001666 response to hypoxia
GO:0006397 mRNA processing
GO:0006406 mRNA export from nucleus
GO:0007283 spermatogenesis
GO:0030154 cell differentiation
GO:0035553 oxidative single-stranded RNA demethylation
GO:0055114 oxidation-reduction process
Cellular Component
GO:0005634 nucleus
GO:0016607 nuclear speck
Orthologs
Species
Homo sapiens
Mus musculus
Gene ID
Gene Order
ENSG00000091542
View Gene Order
ENSMUSG00000042650
View Gene Order
Cross-References
SwissProt E1BH29
TrEMBL
UniProt Splice Variant
Entrez Gene 533303
UniGene Bt.6937
RefSeq NM_001205517
HUGO
OMIM
CCDS
HPRD
IMGT
EMBL DAAA02048990
GenPept
RNA Seq Atlas 533303

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca