Version 5.4
Mus musculus Gene: Calcoco1
Summary
InnateDB Gene IDBG-189181.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Calcoco1
Gene Name calcium binding and coiled coil domain 1
Synonyms 1810009B06Rik; Cocoa; Gcap11; mKIAA1536
Species Mus musculus
Ensembl Gene ENSMUSG00000023055
Encoded Proteins
IDBP-189183
calcium binding and coiled coil domain 1
IDBP-626148
calcium binding and coiled coil domain 1
IDBP-626149
calcium binding and coiled coil domain 1
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000012822:
Gene Information
Type Protein coding
Genomic Location Chromosome 15:102706779-102722178
Strand Reverse strand
Band F3
Transcripts
ENSMUST00000023818 ENSMUSP00000023818
ENSMUST00000168112 ENSMUSP00000128307
ENSMUST00000171838 ENSMUSP00000130170
ENSMUST00000166943
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 2 experimentally validated interaction(s) in this database.
They are also associated with 14 interaction(s) predicted by orthology.
Experimentally validated
Total 2 [view]
Protein-Protein 2 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Predicted by orthology
Total 14 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0003682 chromatin binding
GO:0003712 transcription cofactor activity
GO:0003713 transcription coactivator activity
GO:0005515 protein binding
GO:0008013 beta-catenin binding
GO:0008022 protein C-terminus binding
GO:0030374 ligand-dependent nuclear receptor transcription coactivator activity
GO:0043565 sequence-specific DNA binding
GO:0044212 transcription regulatory region DNA binding
GO:0070016 armadillo repeat domain binding
Biological Process
GO:0006351 transcription, DNA-templated
GO:0007165 signal transduction
GO:0016055 Wnt signaling pathway
GO:0030518 intracellular steroid hormone receptor signaling pathway
GO:0045893 positive regulation of transcription, DNA-templated
GO:0045944 positive regulation of transcription from RNA polymerase II promoter
Cellular Component
GO:0000790 nuclear chromatin
GO:0005634 nucleus
GO:0005737 cytoplasm
GO:0043231 intracellular membrane-bounded organelle
Orthologs
Species
Homo sapiens
Bos taurus
Gene ID
Gene Order
ENSG00000012822
View Gene Order
ENSBTAG00000015016
Not yet available
Pathway Predictions based on Human Orthology Data
NETPATH
REACTOME
KEGG
INOH
PID NCI
era_genomic_pathway
Validated nuclear estrogen receptor alpha network
Cross-References
SwissProt
TrEMBL
UniProt Splice Variant
Entrez Gene
UniGene Mm.439283 Mm.474613 Mm.71682
RefSeq NM_026192
OMIM
CCDS CCDS27889
HPRD
IMGT
MGI ID
MGI Symbol
EMBL
GenPept
RNA Seq Atlas

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca