Version 5.4
Mus musculus Gene: Tfip11
Summary
InnateDB Gene IDBG-191098.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Tfip11
Gene Name tuftelin interacting protein 11
Synonyms 2810002G02Rik; AF097181; AW046167; Srr1; TIP33; Tip39
Species Mus musculus
Ensembl Gene ENSMUSG00000029345
Encoded Proteins
IDBP-191100
tuftelin interacting protein 11
IDBP-540593
tuftelin interacting protein 11
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000100109:
TFIP11 is a nuclear speckle-localized protein that may play a role in spliceosome disassembly in Cajal bodies (Stanek et al., 2008 [PubMed 18367544]).[supplied by OMIM, Apr 2009]
Gene Information
Type Protein coding
Genomic Location Chromosome 5:112326358-112338073
Strand Forward strand
Band F
Transcripts
ENSMUST00000031288 ENSMUSP00000031288
ENSMUST00000129528 ENSMUSP00000115225
ENSMUST00000126736
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 8 experimentally validated interaction(s) in this database.
They are also associated with 11 interaction(s) predicted by orthology.
Experimentally validated
Total 8 [view]
Protein-Protein 8 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Predicted by orthology
Total 11 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0003676 nucleic acid binding
GO:0003677 DNA binding
GO:0005515 protein binding
Biological Process
GO:0000390 spliceosomal complex disassembly
GO:0006355 regulation of transcription, DNA-templated
GO:0030154 cell differentiation
GO:0030198 extracellular matrix organization
GO:0031214 biomineral tissue development
Cellular Component
GO:0005578 proteinaceous extracellular matrix
GO:0005622 intracellular
GO:0005634 nucleus
GO:0005681 spliceosomal complex
GO:0005737 cytoplasm
GO:0016607 nuclear speck
GO:0071008 U2-type post-mRNA release spliceosomal complex
GO:0071013 catalytic step 2 spliceosome
Orthologs
Species
Homo sapiens
Bos taurus
Gene ID
Gene Order
ENSG00000100109
View Gene Order
ENSBTAG00000012288
Not yet available
Cross-References
SwissProt
TrEMBL
UniProt Splice Variant
Entrez Gene
UniGene Mm.172947
RefSeq NM_018783
OMIM
CCDS CCDS19539
HPRD
IMGT
MGI ID
MGI Symbol
EMBL
GenPept
RNA Seq Atlas

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca