Version 5.4
Mus musculus Gene: Pkd1l3
Summary
InnateDB Gene IDBG-191342.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Pkd1l3
Gene Name polycystic kidney disease 1 like 3
Synonyms
Species Mus musculus
Ensembl Gene ENSMUSG00000048827
Encoded Proteins
IDBP-191344
polycystic kidney disease 1 like 3
IDBP-262801
polycystic kidney disease 1 like 3
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary Currently no Entrez Summary Available. You might want to check the Summary Sections of the Orthologs.
Gene Information
Type Protein coding
Genomic Location Chromosome 8:109614517-109672592
Strand Forward strand
Band D3
Transcripts
ENSMUST00000057344 ENSMUSP00000051512
ENSMUST00000109242 ENSMUSP00000104865
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 0 experimentally validated interaction(s) in this database.
Gene Ontology

Molecular Function
Accession GO Term
GO:0005216 ion channel activity
GO:0005261 cation channel activity
GO:0005262 calcium channel activity
GO:0005509 calcium ion binding
GO:0005515 protein binding
GO:0008324 cation transmembrane transporter activity
GO:0030246 carbohydrate binding
GO:0033040 sour taste receptor activity
Biological Process
GO:0001581 detection of chemical stimulus involved in sensory perception of sour taste
GO:0006811 ion transport
GO:0006812 cation transport
GO:0007218 neuropeptide signaling pathway
GO:0050915 sensory perception of sour taste
GO:0050982 detection of mechanical stimulus
GO:0055085 transmembrane transport
GO:0070588 calcium ion transmembrane transport
GO:0071468 cellular response to acidity
Cellular Component
GO:0005886 plasma membrane
GO:0009986 cell surface
GO:0016020 membrane
GO:0016021 integral component of membrane
GO:0070062 extracellular vesicular exosome
Orthologs
No orthologs found for this gene
Cross-References
SwissProt Q2EG98
TrEMBL A2A258
UniProt Splice Variant
Entrez Gene 244646
UniGene Mm.436810
RefSeq NM_001286454 NM_181544 XM_006531002 XM_006531003 XM_006531004 XM_006531005 XM_006531006 NM_001039700 XM_006531001
OMIM
CCDS CCDS22654 CCDS40472
HPRD
IMGT
MGI ID MGI:2664670
MGI Symbol Pkd1l3
EMBL AB290926 AC125162 AY164486 DQ382344 DQ382345 DQ382346 DQ382347 DQ382348 DQ382349 DQ382350
GenPept AAO32799 ABD36562 ABD36563 ABD36564 ABD36565 ABD36566 ABD36567 ABD36568 BAF45379
RNA Seq Atlas 244646

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca