Version 5.4
Mus musculus Gene: Stag1
Summary
InnateDB Gene IDBG-193250.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Stag1
Gene Name stromal antigen 1
Synonyms AU045003; SA-1; Scc3
Species Mus musculus
Ensembl Gene ENSMUSG00000037286
Encoded Proteins
IDBP-193252
stromal antigen 1
IDBP-537139
stromal antigen 1
IDBP-541789
stromal antigen 1
IDBP-541063
stromal antigen 1
IDBP-536680
stromal antigen 1
IDBP-532169
stromal antigen 1
IDBP-542495
stromal antigen 1
IDBP-542492
stromal antigen 1
IDBP-541084
stromal antigen 1
IDBP-535005
stromal antigen 1
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000118007:
This gene is a member of the SCC3 family and is expressed in the nucleus. It encodes a component of cohesin, a multisubunit protein complex that provides sister chromatid cohesion along the length of a chromosome from DNA replication through prophase and prometaphase, after which it is dissociated in preparation for segregation during anaphase. [provided by RefSeq, Jul 2008]
Gene Information
Type Protein coding
Genomic Location Chromosome 9:100597798-100959375
Strand Forward strand
Band E3.3
Transcripts
ENSMUST00000041418 ENSMUSP00000040724
ENSMUST00000124487 ENSMUSP00000123595
ENSMUST00000146312 ENSMUSP00000116597
ENSMUST00000129269 ENSMUSP00000116205
ENSMUST00000143816
ENSMUST00000123315
ENSMUST00000144005
ENSMUST00000138405 ENSMUSP00000116322
ENSMUST00000155108 ENSMUSP00000118952
ENSMUST00000123302 ENSMUSP00000117879
ENSMUST00000133388 ENSMUSP00000119637
ENSMUST00000149771
ENSMUST00000143150
ENSMUST00000146934 ENSMUSP00000120974
ENSMUST00000122824
ENSMUST00000143955 ENSMUSP00000115460
ENSMUST00000191345
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 5 experimentally validated interaction(s) in this database.
They are also associated with 24 interaction(s) predicted by orthology.
Experimentally validated
Total 5 [view]
Protein-Protein 5 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Predicted by orthology
Total 24 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0003682 chromatin binding
GO:0005488 binding
GO:0005515 protein binding
Biological Process
GO:0007059 chromosome segregation
GO:0007067 mitotic nuclear division
Cellular Component
GO:0000785 chromatin
GO:0005634 nucleus
GO:0005654 nucleoplasm
GO:0030054 cell junction
Orthologs
Species
Homo sapiens
Bos taurus
Gene ID
Gene Order
ENSG00000118007
View Gene Order
ENSBTAG00000035437
Not yet available
Pathways
NETPATH
REACTOME
REACT_75800
Meiotic Synapsis pathway
REACT_200794
Mus musculus biological processes pathway
REACT_249770
Cell Cycle, Mitotic pathway
REACT_207679
Separation of Sister Chromatids pathway
REACT_198961
Resolution of Sister Chromatid Cohesion pathway
REACT_198626
Meiotic synapsis pathway
REACT_188804
Cell Cycle pathway
REACT_241408
M Phase pathway
REACT_250427
Mitotic Telophase/Cytokinesis pathway
REACT_199403
Mitotic Metaphase and Anaphase pathway
REACT_256756
Mitotic Prometaphase pathway
REACT_196634
Cohesin Loading onto Chromatin pathway
REACT_196614
Establishment of Sister Chromatid Cohesion pathway
REACT_198624
Meiosis pathway
REACT_202512
Mitotic Anaphase pathway
REACT_253623
S Phase pathway
KEGG
mmu04110
Cell cycle pathway
INOH
PID NCI
Pathway Predictions based on Human Orthology Data
NETPATH
REACTOME
REACT_75792
Meiotic synapsis pathway
REACT_150425
Resolution of Sister Chromatid Cohesion pathway
REACT_682
Mitotic Prometaphase pathway
REACT_150471
Separation of Sister Chromatids pathway
REACT_150421
Cohesin Loading onto Chromatin pathway
REACT_1932
Mitotic Telophase/Cytokinesis pathway
REACT_150266
Establishment of Sister Chromatid Cohesion pathway
REACT_899
S Phase pathway
REACT_115566
Cell Cycle pathway
REACT_910
M Phase pathway
REACT_1275
Mitotic Anaphase pathway
REACT_152
Cell Cycle, Mitotic pathway
REACT_111183
Meiosis pathway
REACT_150314
Mitotic Metaphase and Anaphase pathway
KEGG
hsa04110
Cell cycle pathway
INOH
PID NCI
Cross-References
SwissProt
TrEMBL D3YYD4 D6RH50
UniProt Splice Variant
Entrez Gene 20842
UniGene Mm.419492 Mm.42135
RefSeq NM_009282 XM_006510923 XM_006510924 XM_006510925 XM_006510926 XM_006510927
OMIM
CCDS CCDS23441
HPRD
IMGT
MGI ID MGI:1098658
MGI Symbol Stag1
EMBL AC115355 AC134825 AC146297 AC147565
GenPept
RNA Seq Atlas 20842

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca