Version 5.4
Mus musculus Gene: Sfswap
Summary
InnateDB Gene IDBG-201835.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Sfswap
Gene Name splicing factor, suppressor of white-apricot homolog (Drosophila)
Synonyms
Species Mus musculus
Ensembl Gene ENSMUSG00000029439
Encoded Proteins
IDBP-201837
splicing factor, suppressor of white-apricot homolog (Drosophila)
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000061936:
This gene encodes a human homolog of Drosophila splicing regulatory protein. This gene autoregulates its expression by control of splicing of its first two introns. In addition, it also regulates the splicing of fibronectin and CD45 genes. Two transcript variants encoding different isoforms have been identified. [provided by RefSeq, May 2012]
Gene Information
Type Protein coding
Genomic Location Chromosome 5:129501231-129571383
Strand Forward strand
Band G1.3
Transcripts
ENSMUST00000053737 ENSMUSP00000062413
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 2 experimentally validated interaction(s) in this database.
They are also associated with 3 interaction(s) predicted by orthology.
Experimentally validated
Total 2 [view]
Protein-Protein 2 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Predicted by orthology
Total 3 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0003723 RNA binding
Biological Process
GO:0006351 transcription, DNA-templated
GO:0006355 regulation of transcription, DNA-templated
GO:0006396 RNA processing
GO:0006397 mRNA processing
GO:0008380 RNA splicing
GO:0048025 negative regulation of mRNA splicing, via spliceosome
Cellular Component
GO:0005634 nucleus
Orthologs
Species
Homo sapiens
Bos taurus
Gene ID
Gene Order
ENSG00000061936
View Gene Order
ENSBTAG00000000439
Not yet available
Cross-References
SwissProt Q3USH5
TrEMBL
UniProt Splice Variant
Entrez Gene 231769
UniGene
RefSeq NM_172276
OMIM
CCDS CCDS19694
HPRD
IMGT
MGI ID MGI:101760
MGI Symbol Sfswap
EMBL AC114614 AC114657 AK031872 AK140369
GenPept BAC27586 BAE24357
RNA Seq Atlas 231769

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca