Version 5.4
Mus musculus Gene: Rere
Summary
InnateDB Gene IDBG-205779.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Rere
Gene Name arginine glutamic acid dipeptide (RE) repeats
Synonyms 1110033A15Rik; AI414665; ARG; ARP; ATN1L; Atr2; AW742570; DNB1; eye; eyes3; mKIAA0458
Species Mus musculus
Ensembl Gene ENSMUSG00000039852
Encoded Proteins
IDBP-270359
arginine glutamic acid dipeptide (RE) repeats
IDBP-270363
arginine glutamic acid dipeptide (RE) repeats
IDBP-535878
arginine glutamic acid dipeptide (RE) repeats
IDBP-532151
arginine glutamic acid dipeptide (RE) repeats
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000142599:
This gene encodes a member of the atrophin family of arginine-glutamic acid (RE) dipeptide repeat-containing proteins. The encoded protein co-localizes with a transcription factor in the nucleus, and its overexpression triggers apoptosis. A similar protein in mouse associates with histone deacetylase and is thought to function as a transcriptional co-repressor during embryonic development. Multiple transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Jul 2008]
Gene Information
Type Protein coding
Genomic Location Chromosome 4:150281646-150621966
Strand Forward strand
Band E2
Transcripts
ENSMUST00000105682 ENSMUSP00000101307
ENSMUST00000105680 ENSMUSP00000101305
ENSMUST00000129188
ENSMUST00000131600 ENSMUSP00000115385
ENSMUST00000142379
ENSMUST00000137112
ENSMUST00000136646 ENSMUSP00000121544
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 6 experimentally validated interaction(s) in this database.
They are also associated with 21 interaction(s) predicted by orthology.
Experimentally validated
Total 6 [view]
Protein-Protein 4 [view]
Protein-DNA 1 [view]
Protein-RNA 1 [view]
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Predicted by orthology
Total 21 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0003677 DNA binding
GO:0003682 chromatin binding
GO:0003700 sequence-specific DNA binding transcription factor activity
GO:0005515 protein binding
GO:0008270 zinc ion binding
GO:0043565 sequence-specific DNA binding
Biological Process
GO:0006338 chromatin remodeling
GO:0006351 transcription, DNA-templated
GO:0006355 regulation of transcription, DNA-templated
GO:0007275 multicellular organismal development
Cellular Component
GO:0000118 histone deacetylase complex
GO:0005739 mitochondrion
GO:0016605 PML body
Orthologs
Species
Homo sapiens
Bos taurus
Gene ID
Gene Order
ENSG00000142599
View Gene Order
ENSBTAG00000018272
Not yet available
Cross-References
SwissProt Q80TZ9
TrEMBL A2A7T1 A2A7T3 B1AS11 Q2NLC0
UniProt Splice Variant
Entrez Gene 68703
UniGene Mm.291274 Mm.385974
RefSeq NM_001085492 XM_006537075 XM_006537076 XM_006537077 XM_006537078 XM_006537079 XM_006537080 XM_006537081 XM_006537082 XM_006537083 XM_006537084 XM_006537085 XM_006537086 XM_006537087 XM_006539136 XM_006539137 XM_006539138 XM_006539139 XM_006539140 XM_006539141 XM_006539142 XM_006539144 XM_006539145 XM_006539147
OMIM
CCDS CCDS38979
HPRD
IMGT
MGI ID MGI:2683486
MGI Symbol Rere
EMBL AK122287 AL606903 AL606982 AL606988 AL691453 BC110693 CU210933 CU210934
GenPept AAI10694 BAC65569 CAM16595 CAM21921 CAM22173 CAQ51525 CAQ51728
RNA Seq Atlas 68703

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca