Version 5.4
Mus musculus Gene: Cd93
Summary
InnateDB Gene IDBG-208971.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Cd93
Gene Name CD93 antigen
Synonyms 6030404G09Rik; AA145088; AA4.1; AW555904; C1qr1; C1qrp; Ly68
Species Mus musculus
Ensembl Gene ENSMUSG00000027435
Encoded Proteins
IDBP-208973
CD93 antigen
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000125810:
The protein encoded by this gene is a cell-surface glycoprotein and type I membrane protein that was originally identified as a myeloid cell-specific marker. The encoded protein was once thought to be a receptor for C1q, but now is thought to instead be involved in intercellular adhesion and in the clearance of apoptotic cells. The intracellular cytoplasmic tail of this protein has been found to interact with moesin, a protein known to play a role in linking transmembrane proteins to the cytoskeleton and in the remodelling of the cytoskeleton. [provided by RefSeq, Jul 2008]
Gene Information
Type Protein coding
Genomic Location Chromosome 2:148436640-148443563
Strand Reverse strand
Band G3
Transcripts
ENSMUST00000099269 ENSMUSP00000096876
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 3 experimentally validated interaction(s) in this database.
They are also associated with 9 interaction(s) predicted by orthology.
Experimentally validated
Total 3 [view]
Protein-Protein 3 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Predicted by orthology
Total 9 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0001849 complement component C1q binding
GO:0005509 calcium ion binding
GO:0005515 protein binding
GO:0030246 carbohydrate binding
Biological Process
GO:0016337 single organismal cell-cell adhesion
Cellular Component
GO:0005886 plasma membrane
GO:0009986 cell surface
GO:0016021 integral component of membrane
GO:0016023 cytoplasmic membrane-bounded vesicle
Orthologs
Species
Homo sapiens
Bos taurus
Gene ID
Gene Order
ENSG00000125810
View Gene Order
ENSBTAG00000004207
Not yet available
Cross-References
SwissProt O89103
TrEMBL A7LNQ8 A7LNR0 A7LNR1
UniProt Splice Variant
Entrez Gene 17064
UniGene Mm.393234 Mm.398078 Mm.407960 Mm.681
RefSeq NM_010740
OMIM
CCDS CCDS16839
HPRD
IMGT
MGI ID MGI:106664
MGI Symbol Cd93
EMBL AF074856 AF081789 AF099938 AF099939 AK079060 AK155060 AL935149 EU050985 EU050987 EU050988
GenPept AAC62649 AAC63274 AAD47906 ABS84832 ABS84834 ABS84835 BAC37518 BAE33020 CAM26726
RNA Seq Atlas 17064

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca