Version 5.4
Mus musculus Gene: Atxn7l3
Summary
InnateDB Gene IDBG-212566.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Atxn7l3
Gene Name ataxin 7-like 3
Synonyms
Species Mus musculus
Ensembl Gene ENSMUSG00000059995
Encoded Proteins
IDBP-212568
ataxin 7-like 3
IDBP-267308
ataxin 7-like 3
IDBP-267310
ataxin 7-like 3
IDBP-536058
ataxin 7-like 3
IDBP-540098
ataxin 7-like 3
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000087152:
Gene Information
Type Protein coding
Genomic Location Chromosome 11:102289300-102296631
Strand Reverse strand
Band D
Transcripts
ENSMUST00000073234 ENSMUSP00000072967
ENSMUST00000107134 ENSMUSP00000102752
ENSMUST00000107132 ENSMUSP00000102750
ENSMUST00000137387 ENSMUSP00000122610
ENSMUST00000145484
ENSMUST00000141516 ENSMUSP00000121917
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 1 experimentally validated interaction(s) in this database.
They are also associated with 13 interaction(s) predicted by orthology.
Experimentally validated
Total 1 [view]
Protein-Protein 1 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Predicted by orthology
Total 13 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0003713 transcription coactivator activity
GO:0005515 protein binding
GO:0008270 zinc ion binding
GO:0030374 ligand-dependent nuclear receptor transcription coactivator activity
Biological Process
GO:0006351 transcription, DNA-templated
GO:0016578 histone deubiquitination
GO:0045893 positive regulation of transcription, DNA-templated
Cellular Component
GO:0000124 SAGA complex
GO:0071819 DUBm complex
Orthologs
Species
Homo sapiens
Bos taurus
Gene ID
Gene Order
ENSG00000087152
View Gene Order
ENSBTAG00000019662
Not yet available
Pathways
NETPATH
REACTOME
REACT_218274
Chromatin organization pathway
REACT_226917
HATs acetylate histones pathway
REACT_202766
Chromatin modifying enzymes pathway
KEGG
INOH
PID NCI
Pathway Predictions based on Human Orthology Data
NETPATH
REACTOME
REACT_172610
HATs acetylate histones pathway
REACT_172623
Chromatin organization pathway
REACT_172633
Chromatin modifying enzymes pathway
KEGG
INOH
PID NCI
Cross-References
SwissProt
TrEMBL Z4YN62
UniProt Splice Variant
Entrez Gene 217218
UniGene Mm.390381 Mm.466283
RefSeq NM_001098836 NM_001098837 XM_006533041 XM_006533042 XM_006533043 XM_006533044 XM_006533045 XM_006533046 XM_006533047 XM_006533048
OMIM
CCDS CCDS48941 CCDS48942
HPRD
IMGT
MGI ID MGI:3036270
MGI Symbol Atxn7l3
EMBL AL954730
GenPept
RNA Seq Atlas 217218

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca