Version 5.4
Mus musculus Gene: Slc35c2
Summary
InnateDB Gene IDBG-212587.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Slc35c2
Gene Name solute carrier family 35, member C2
Synonyms
Species Mus musculus
Ensembl Gene ENSMUSG00000017664
Encoded Proteins
IDBP-212589
solute carrier family 35, member C2
IDBP-262684
solute carrier family 35, member C2
IDBP-262686
solute carrier family 35, member C2
IDBP-262688
solute carrier family 35, member C2
IDBP-532724
solute carrier family 35, member C2
IDBP-532394
solute carrier family 35, member C2
IDBP-542138
solute carrier family 35, member C2
IDBP-539996
solute carrier family 35, member C2
IDBP-542137
solute carrier family 35, member C2
IDBP-534974
solute carrier family 35, member C2
IDBP-531862
solute carrier family 35, member C2
IDBP-542132
solute carrier family 35, member C2
IDBP-539413
solute carrier family 35, member C2
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000080189:
Oxygenation levels play an important role in the regulation of cellular invasiveness which occurs during early implantation when the trophoblast cells invade the uterus as well as during tumour progression and metastasis. This gene, which is regulated by oxygen tension, is induced in hypoxic trophoblast cells and is overexpressed in ovarian cancer. Two protein isoforms are encoded by transcript variants of this gene. [provided by RefSeq, Jul 2008]
Gene Information
Type Protein coding
Genomic Location Chromosome 2:165276554-165287869
Strand Reverse strand
Band H3
Transcripts
ENSMUST00000017808 ENSMUSP00000017808
ENSMUST00000109300 ENSMUSP00000104923
ENSMUST00000109299 ENSMUSP00000104922
ENSMUST00000109298 ENSMUSP00000104921
ENSMUST00000132270 ENSMUSP00000125708
ENSMUST00000125550
ENSMUST00000154608
ENSMUST00000129336 ENSMUSP00000123299
ENSMUST00000145301 ENSMUSP00000123757
ENSMUST00000155289 ENSMUSP00000119071
ENSMUST00000133961 ENSMUSP00000118227
ENSMUST00000156134 ENSMUSP00000116288
ENSMUST00000129210 ENSMUSP00000118605
ENSMUST00000131409 ENSMUSP00000120036
ENSMUST00000147247
ENSMUST00000130393 ENSMUSP00000123450
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 1 experimentally validated interaction(s) in this database.
They are also associated with 1 interaction(s) predicted by orthology.
Experimentally validated
Total 1 [view]
Protein-Protein 0
Protein-DNA 0
Protein-RNA 1 [view]
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Predicted by orthology
Total 1 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0003674 molecular_function
Biological Process
GO:0006810 transport
GO:0010629 negative regulation of gene expression
GO:0036065 fucosylation
GO:0036066 protein O-linked fucosylation
GO:0045747 positive regulation of Notch signaling pathway
GO:0055085 transmembrane transport
Cellular Component
GO:0005793 endoplasmic reticulum-Golgi intermediate compartment
GO:0005801 cis-Golgi network
GO:0016021 integral component of membrane
Orthologs
Species
Homo sapiens
Bos taurus
Gene ID
Gene Order
ENSG00000080189
View Gene Order
ENSBTAG00000003635
Not yet available
Cross-References
SwissProt
TrEMBL
UniProt Splice Variant
Entrez Gene
UniGene Mm.21184 Mm.395980
RefSeq NM_001252573 NM_001252574 NM_001252575 NM_144893 XM_006499370 XM_006499371 XM_006499372 XM_006499373 XM_006499374 XM_006499375
OMIM
CCDS CCDS17074
HPRD
IMGT
MGI ID
MGI Symbol
EMBL
GenPept
RNA Seq Atlas

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca