Version 5.4
Homo sapiens Gene: SND1
Summary
InnateDB Gene IDBG-39509.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol SND1
Gene Name staphylococcal nuclease and tudor domain containing 1
Synonyms
Species Homo sapiens
Ensembl Gene ENSG00000197157
Encoded Proteins
IDBP-39511
staphylococcal nuclease and tudor domain containing 1
IDBP-479890
staphylococcal nuclease and tudor domain containing 1
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary Currently no Entrez Summary Available. You might want to check the Summary Sections of the Orthologs.
Gene Information
Type Protein coding
Genomic Location Chromosome 7:127652180-128092609
Strand Forward strand
Band q32.1
Transcripts
ENST00000354725 ENSP00000346762
ENST00000463020
ENST00000461056
ENST00000468621
ENST00000483503
ENST00000492772
ENST00000468166
ENST00000465900
ENST00000486037 ENSP00000419327
ENST00000484767
ENST00000492840
ENST00000470723
ENST00000467238
ENST00000470463
ENST00000489417
ENST00000485871
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 79 experimentally validated interaction(s) in this database.
They are also associated with 3 interaction(s) predicted by orthology.
Experimentally validated
Total 79 [view]
Protein-Protein 78 [view]
Protein-DNA 1 [view]
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Predicted by orthology
Total 3 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0003676 nucleic acid binding
GO:0003712 transcription cofactor activity
GO:0004518 nuclease activity
GO:0005515 protein binding
GO:0016788 hydrolase activity, acting on ester bonds
GO:0044822 poly(A) RNA binding
Biological Process
GO:0001649 osteoblast differentiation
GO:0006351 transcription, DNA-templated
GO:0006355 regulation of transcription, DNA-templated
GO:0008152 metabolic process
GO:0016032 viral process
GO:0031047 gene silencing by RNA
GO:0090305 nucleic acid phosphodiester bond hydrolysis
Cellular Component
GO:0005634 nucleus
GO:0005737 cytoplasm
GO:0005739 mitochondrion
GO:0016020 membrane
GO:0016442 RISC complex
GO:0042470 melanosome
GO:0070062 extracellular vesicular exosome
GO:0097433 dense body
Orthologs
Species
Mus musculus
Bos taurus
Gene ID
Gene Order
ENSMUSG00000001424
View Gene Order
ENSBTAG00000010692
Not yet available
Pathways
NETPATH
NetPath_16
IL4 pathway
REACTOME
KEGG
INOH
PID NCI
cmyb_pathway
C-MYB transcription factor network
Cross-References
SwissProt
TrEMBL
UniProt Splice Variant
Entrez Gene
UniGene Hs.602818
RefSeq NM_014390
HUGO
OMIM
CCDS CCDS34747
HPRD 03714
IMGT
EMBL
GenPept
RNA Seq Atlas

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca