Version 5.4
Homo sapiens Gene: GATAD2A
Summary
InnateDB Gene IDBG-39711.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol GATAD2A
Gene Name GATA zinc finger domain containing 2A
Synonyms
Species Homo sapiens
Ensembl Gene ENSG00000167491
Encoded Proteins
IDBP-39713
GATA zinc finger domain containing 2A
IDBP-39715
GATA zinc finger domain containing 2A
IDBP-295477
GATA zinc finger domain containing 2A
IDBP-376604
GATA zinc finger domain containing 2A
IDBP-376619
GATA zinc finger domain containing 2A
IDBP-376621
GATA zinc finger domain containing 2A
IDBP-376629
GATA zinc finger domain containing 2A
IDBP-376630
GATA zinc finger domain containing 2A
IDBP-376631
GATA zinc finger domain containing 2A
IDBP-809121
GATA zinc finger domain containing 2A
IDBP-809125
GATA zinc finger domain containing 2A
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary Currently no Entrez Summary Available. You might want to check the Summary Sections of the Orthologs.
Gene Information
Type Protein coding
Genomic Location Chromosome 19:19385826-19508931
Strand Forward strand
Band p13.11
Transcripts
ENST00000358713 ENSP00000351552
ENST00000360315 ENSP00000353463
ENST00000404158 ENSP00000384899
ENST00000417582 ENSP00000403703
ENST00000457895 ENSP00000404212
ENST00000432704 ENSP00000390495
ENST00000448576
ENST00000429242 ENSP00000414252
ENST00000444839 ENSP00000407293
ENST00000418032 ENSP00000411869
ENST00000494516 ENSP00000477171
ENST00000473184
ENST00000609040 ENSP00000476500
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 34 experimentally validated interaction(s) in this database.
They are also associated with 8 interaction(s) predicted by orthology.
Experimentally validated
Total 34 [view]
Protein-Protein 32 [view]
Protein-DNA 0
Protein-RNA 1 [view]
DNA-DNA 1 [view]
RNA-RNA 0
DNA-RNA 0
Predicted by orthology
Total 8 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0003700 sequence-specific DNA binding transcription factor activity
GO:0005515 protein binding
GO:0008270 zinc ion binding
GO:0030674 protein binding, bridging
GO:0043565 sequence-specific DNA binding
Biological Process
GO:0001568 blood vessel development
GO:0001701 in utero embryonic development
GO:0001842 neural fold formation
GO:0006306 DNA methylation
GO:0006351 transcription, DNA-templated
GO:0006355 regulation of transcription, DNA-templated
GO:0010172 embryonic body morphogenesis
GO:0012501 programmed cell death
GO:0021506 anterior neuropore closure
GO:0045892 negative regulation of transcription, DNA-templated
Cellular Component
GO:0005634 nucleus
GO:0016581 NuRD complex
GO:0016607 nuclear speck
Orthologs
Species
Mus musculus
Bos taurus
Gene ID
Gene Order
ENSMUSG00000036180
View Gene Order
ENSBTAG00000003034
Not yet available
Pathways
NETPATH
REACTOME
REACT_953
RNA Polymerase I Transcription Initiation pathway
REACT_1309
RNA Polymerase I Transcription pathway
REACT_1974
RNA Polymerase I Promoter Clearance pathway
REACT_228222
HDACs deacetylate histones pathway
REACT_172623
Chromatin organization pathway
REACT_172633
Chromatin modifying enzymes pathway
REACT_21352
RNA Polymerase I, RNA Polymerase III, and Mitochondrial Transcription pathway
REACT_71
Gene Expression pathway
KEGG
INOH
PID NCI
hdac_classi_pathway
Signaling events mediated by HDAC Class I
Cross-References
SwissProt
TrEMBL
UniProt Splice Variant
Entrez Gene
UniGene Hs.118964
RefSeq NM_001300946 NM_017660 XM_005259954 XM_005259956 XM_005259957 XM_005259958 XM_005259959 XM_005259960 XM_005259961 XM_005259962 XM_006722780
HUGO
OMIM
CCDS CCDS12402
HPRD 11741
IMGT
EMBL
GenPept
RNA Seq Atlas

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca