Version 5.4
Homo sapiens Gene: SUGP1
Summary
InnateDB Gene IDBG-39752.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol SUGP1
Gene Name SURP and G patch domain containing 1
Synonyms
Species Homo sapiens
Ensembl Gene ENSG00000105705
Encoded Proteins
IDBP-39756
SURP and G patch domain containing 1
IDBP-593649
SURP and G patch domain containing 1
IDBP-813787
SURP and G patch domain containing 1
IDBP-765986
IDBP-765819
IDBP-765147
IDBP-762876
IDBP-766219
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary SF4 is a member of the SURP family of splicing factors.[supplied by OMIM, Sep 2003]
Gene Information
Type Protein coding
Genomic Location Chromosome 19:19276018-19320844
Strand Reverse strand
Band p13.11
Transcripts
ENST00000247001 ENSP00000247001
ENST00000535070 ENSP00000439172
ENST00000591007
ENST00000590439 ENSP00000477290
ENST00000588731 ENSP00000465413
ENST00000591350 ENSP00000468499
ENST00000586387
ENST00000592188
ENST00000585444 ENSP00000468771
ENST00000589144 ENSP00000466402
ENST00000587716
ENST00000588580
ENST00000587119 ENSP00000466188
ENST00000585763
ENST00000606725
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 51 experimentally validated interaction(s) in this database.
They are also associated with 1 interaction(s) predicted by orthology.
Experimentally validated
Total 51 [view]
Protein-Protein 51 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Predicted by orthology
Total 1 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0003676 nucleic acid binding
GO:0003723 RNA binding
GO:0005515 protein binding
GO:0044822 poly(A) RNA binding
Biological Process
GO:0000398 mRNA splicing, via spliceosome
GO:0006396 RNA processing
GO:0008380 RNA splicing
GO:0010467 gene expression
Cellular Component
GO:0005654 nucleoplasm
GO:0005681 spliceosomal complex
Orthologs
Species
Mus musculus
Bos taurus
Gene ID
Gene Order
ENSMUSG00000011306
View Gene Order
ENSBTAG00000006116
Not yet available
Pathways
NETPATH
REACTOME
REACT_467
mRNA Splicing - Major Pathway pathway
REACT_125
Processing of Capped Intron-Containing Pre-mRNA pathway
REACT_1735
mRNA Splicing pathway
REACT_71
Gene Expression pathway
KEGG
INOH
PID NCI
Cross-References
SwissProt
TrEMBL K7ELR6 K7ESM0
UniProt Splice Variant
Entrez Gene 57794
UniGene Hs.515274
RefSeq NM_172231
HUGO HGNC:18643
OMIM 607992
CCDS CCDS12399
HPRD 10468
IMGT
EMBL AC003967 AC004475 AC022543
GenPept
RNA Seq Atlas 57794

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca