Version 5.4
Mus musculus Gene: Shprh
Summary
InnateDB Gene IDBG-488459.3
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Shprh
Gene Name SNF2 histone linker PHD RING helicase
Synonyms
Species Mus musculus
Ensembl Gene ENSMUSG00000090112
Encoded Proteins
IDBP-133392
SNF2 histone linker PHD RING helicase
IDBP-627869
SNF2 histone linker PHD RING helicase
IDBP-534925
SNF2 histone linker PHD RING helicase
IDBP-627870
SNF2 histone linker PHD RING helicase
IDBP-533378
SNF2 histone linker PHD RING helicase
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000146414:
SHPRH is a ubiquitously expressed protein that contains motifs characteristics of several DNA repair proteins, transcription factors, and helicases. SHPRH is a functional homolog of S. cerevisiae RAD5 (Unk et al., 2006 [PubMed 17108083]).[supplied by OMIM, Mar 2008]
Gene Information
Type Protein coding
Genomic Location Chromosome 10:11149427-11217595
Strand Forward strand
Band A1
Transcripts
ENSMUST00000044053 ENSMUSP00000039422
ENSMUST00000054814 ENSMUSP00000125849
ENSMUST00000159810 ENSMUSP00000125457
ENSMUST00000161858
ENSMUST00000159541 ENSMUSP00000132870
ENSMUST00000160461 ENSMUSP00000125127
ENSMUST00000159553
ENSMUST00000161910
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 7 experimentally validated interaction(s) in this database.
They are also associated with 12 interaction(s) predicted by orthology.
Experimentally validated
Total 7 [view]
Protein-Protein 7 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Predicted by orthology
Total 12 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0003676 nucleic acid binding
GO:0003677 DNA binding
GO:0004386 helicase activity
GO:0004842 ubiquitin-protein transferase activity
GO:0005515 protein binding
GO:0005524 ATP binding
GO:0008270 zinc ion binding
GO:0016874 ligase activity
Biological Process
GO:0000209 protein polyubiquitination
GO:0006281 DNA repair
GO:0006334 nucleosome assembly
GO:0016567 protein ubiquitination
Cellular Component
GO:0000786 nucleosome
GO:0005575 cellular_component
GO:0005634 nucleus
Orthologs
Species
Homo sapiens
Bos taurus
Gene ID
Gene Order
ENSG00000146414
View Gene Order
ENSBTAG00000008112
Not yet available
Cross-References
SwissProt
TrEMBL
UniProt Splice Variant
Entrez Gene
UniGene Mm.133101 Mm.397158 Mm.461266
RefSeq NM_001077707 NM_001284354 NM_172937 XM_006512740
OMIM
CCDS CCDS35838 CCDS35839 CCDS70003
HPRD
IMGT
MGI ID
MGI Symbol
EMBL
GenPept
RNA Seq Atlas

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca