Version 5.4
Mus musculus Gene: Cbx6
Summary
InnateDB Gene IDBG-488595.4
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Cbx6
Gene Name chromobox 6
Synonyms
Species Mus musculus
Ensembl Gene ENSMUSG00000089715
Encoded Proteins
IDBP-261981
chromobox homolog 6
IDBP-261983
chromobox homolog 6
IDBP-261985
chromobox homolog 6
IDBP-536189
chromobox homolog 6
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000183741:
Gene Information
Type Protein coding
Genomic Location Chromosome 15:79823896-79834688
Strand Reverse strand
Band E1
Transcripts
ENSMUST00000109627 ENSMUSP00000105255
ENSMUST00000109625 ENSMUSP00000105253
ENSMUST00000109623 ENSMUSP00000105252
ENSMUST00000141345
ENSMUST00000148358 ENSMUSP00000119037
ENSMUST00000127721
ENSMUST00000129614
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 3 experimentally validated interaction(s) in this database.
They are also associated with 46 interaction(s) predicted by orthology.
Experimentally validated
Total 3 [view]
Protein-Protein 3 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Predicted by orthology
Total 46 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0003727 single-stranded RNA binding
GO:0005515 protein binding
Biological Process
GO:0000122 negative regulation of transcription from RNA polymerase II promoter
GO:0006351 transcription, DNA-templated
GO:0016568 chromatin modification
Cellular Component
GO:0000792 heterochromatin
GO:0005634 nucleus
GO:0031519 PcG protein complex
Orthologs
Species
Homo sapiens
Bos taurus
Gene ID
Gene Order
ENSG00000183741
View Gene Order
ENSBTAG00000046724
Not yet available
Pathways
NETPATH
REACTOME
REACT_188970
Oxidative Stress Induced Senescence pathway
REACT_188957
Cellular responses to stress pathway
REACT_188820
Cellular Senescence pathway
KEGG
INOH
PID NCI
Pathway Predictions based on Human Orthology Data
NETPATH
REACTOME
REACT_120956
Cellular responses to stress pathway
REACT_169274
Cellular Senescence pathway
REACT_169436
Oxidative Stress Induced Senescence pathway
KEGG
INOH
PID NCI
Cross-References
SwissProt
TrEMBL D3Z5F6
UniProt Splice Variant
Entrez Gene 494448
UniGene Mm.38438 Mm.457565
RefSeq NM_028763
OMIM
CCDS CCDS37142
HPRD
IMGT
MGI ID MGI:3512628
MGI Symbol Cbx6
EMBL AC113595
GenPept
RNA Seq Atlas 494448

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca