Version 5.4
Bos taurus Gene: CBX6
Summary
InnateDB Gene IDBG-641691.3
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol CBX6
Gene Name chromobox protein homolog 6
Synonyms
Species Bos taurus
Ensembl Gene ENSBTAG00000046724
Encoded Proteins
IDBP-694077
chromobox homolog 6
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000183741:
Gene Information
Type Protein coding
Genomic Location Chromosome 5:110979040-110987124
Strand Reverse strand
Band
Transcripts
ENSBTAT00000064944 ENSBTAP00000055457
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 0 experimentally validated interaction(s) in this database.
They are also associated with 45 interaction(s) predicted by orthology.
Predicted by orthology
Total 45 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0003727 single-stranded RNA binding
GO:0005515 protein binding
Biological Process
GO:0000122 negative regulation of transcription from RNA polymerase II promoter
Cellular Component
GO:0000792 heterochromatin
GO:0005634 nucleus
GO:0031519 PcG protein complex
Orthologs
Species
Homo sapiens
Mus musculus
Gene ID
Gene Order
ENSG00000183741
View Gene Order
ENSMUSG00000089715
View Gene Order
Pathway Predictions based on Human Orthology Data
NETPATH
REACTOME
REACT_120956
Cellular responses to stress pathway
REACT_169274
Cellular Senescence pathway
REACT_169436
Oxidative Stress Induced Senescence pathway
REACT_188970
Oxidative Stress Induced Senescence pathway
REACT_188957
Cellular responses to stress pathway
REACT_188820
Cellular Senescence pathway
KEGG
INOH
PID NCI
Cross-References
SwissProt
TrEMBL A3KMW6 Q52T67
UniProt Splice Variant
Entrez Gene 513830
UniGene Bt.100290
RefSeq NM_001103094
HUGO
OMIM
CCDS
HPRD
IMGT
EMBL AY962102 BC133330 DAAA02014672
GenPept AAI33331 AAX94037
RNA Seq Atlas 513830
Transcript Frequencies
Tag Count based mRNA-Abundances across 87 different Tissues (TPM).

Based on Data from Bovine Gene Atlas

Tag Count based mRNA-Abundances across 87 different Tissues (TPM)

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If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca