Version 5.4
Homo sapiens Gene: CBX6
Summary
InnateDB Gene IDBG-7818.5
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol CBX6
Gene Name chromobox homolog 6
Synonyms
Species Homo sapiens
Ensembl Gene ENSG00000183741
Encoded Proteins
IDBP-7824
chromobox homolog 6
IDBP-293501
chromobox homolog 6
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary Currently no Entrez Summary Available. You might want to check the Summary Sections of the Orthologs.
Gene Information
Type Protein coding
Genomic Location Chromosome 22:38861450-38872314
Strand Reverse strand
Band q13.1
Transcripts
ENST00000216083 ENSP00000216083
ENST00000407418 ENSP00000384490
ENST00000469420
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 68 experimentally validated interaction(s) in this database.
They are also associated with 1 interaction(s) predicted by orthology.
Experimentally validated
Total 68 [view]
Protein-Protein 68 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Predicted by orthology
Total 1 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0003727 single-stranded RNA binding
GO:0005515 protein binding
Biological Process
GO:0000122 negative regulation of transcription from RNA polymerase II promoter
GO:0006351 transcription, DNA-templated
GO:0016568 chromatin modification
Cellular Component
GO:0000792 heterochromatin
GO:0005634 nucleus
GO:0005654 nucleoplasm
GO:0031519 PcG protein complex
Orthologs
Species
Mus musculus
Bos taurus
Gene ID
Gene Order
ENSMUSG00000089715
View Gene Order
ENSBTAG00000046724
Not yet available
Pathways
NETPATH
REACTOME
REACT_120956
Cellular responses to stress pathway
REACT_169274
Cellular Senescence pathway
REACT_169436
Oxidative Stress Induced Senescence pathway
KEGG
INOH
PID NCI
Cross-References
SwissProt
TrEMBL B0QXZ6
UniProt Splice Variant
Entrez Gene 23466
UniGene Hs.511952 Hs.592201 Hs.682605
RefSeq NM_014292 XM_005261412
HUGO HGNC:1556
OMIM
CCDS CCDS13980
HPRD 13005
IMGT
EMBL AL008583
GenPept
RNA Seq Atlas 23466

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca