Version 5.4
Homo sapiens Gene: TLX2
Summary
InnateDB Gene IDBG-57593.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol TLX2
Gene Name T-cell leukemia homeobox 2
Synonyms HOX11L1; NCX
Species Homo sapiens
Ensembl Gene ENSG00000115297
Encoded Proteins
IDBP-57597
T-cell leukemia homeobox 2
IDBP-808140
T-cell leukemia homeobox 2
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene is a member of an orphan homeobox-containing transcription factor family. Studies of the mouse ortholog have shown that the encoded protein is crucial for the development of the enteric nervous system; in humans, loss-of-function may play a role in tumorigenesis of gastrointestinal stromal tumors. [provided by RefSeq, May 2010]
Gene Information
Type Protein coding
Genomic Location Chromosome 2:74513463-74517147
Strand Forward strand
Band p13.1
Transcripts
ENST00000233638 ENSP00000233638
ENST00000497238
ENST00000464417
ENST00000621092 ENSP00000482690
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 10 experimentally validated interaction(s) in this database.
Experimentally validated
Total 10 [view]
Protein-Protein 10 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Gene Ontology

Molecular Function
Accession GO Term
GO:0003674 molecular_function
GO:0003677 DNA binding
GO:0003700 sequence-specific DNA binding transcription factor activity
GO:0005515 protein binding
GO:0043565 sequence-specific DNA binding
Biological Process
GO:0001707 mesoderm formation
GO:0006351 transcription, DNA-templated
GO:0006355 regulation of transcription, DNA-templated
GO:0008150 biological_process
GO:0048484 enteric nervous system development
GO:0050774 negative regulation of dendrite morphogenesis
Cellular Component
GO:0005575 cellular_component
GO:0005634 nucleus
GO:0005737 cytoplasm
Orthologs
Species
Mus musculus
Bos taurus
Gene ID
Gene Order
ENSMUSG00000068327
View Gene Order
ENSBTAG00000016607
Not yet available
Pathways
NETPATH
REACTOME
KEGG
INOH
PID NCI
alk2pathway
ALK2 signaling events
alk1pathway
ALK1 signaling events
Cross-References
SwissProt
TrEMBL
UniProt Splice Variant
Entrez Gene
UniGene Hs.168586
RefSeq NM_016170
HUGO
OMIM
CCDS CCDS1947
HPRD 07254
IMGT
EMBL
GenPept
RNA Seq Atlas

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca