Version 5.4
| Bos taurus Gene: BT.88395 | |||||||||||
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| Summary | |||||||||||
| InnateDB Gene | IDBG-628579.3 | ||||||||||
| Last Modified | 2014-10-13 [Report errors or provide feedback] | ||||||||||
| Gene Symbol | BT.88395 | ||||||||||
| Gene Name | transportin-1 | ||||||||||
| Synonyms | KPNB2; TRN | ||||||||||
| Species | Bos taurus | ||||||||||
| Ensembl Gene | ENSBTAG00000007979 | ||||||||||
| Encoded Proteins |
transportin-1
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| Protein Structure | |||||||||||
| Useful resources | Stemformatics EHFPI ImmGen | ||||||||||
| Entrez Gene | |||||||||||
| Summary |
This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000083312:
This gene encodes the beta subunit of the karyopherin receptor complex which interacts with nuclear localization signals to target nuclear proteins to the nucleus. The karyopherin receptor complex is a heterodimer of an alpha subunit which recognizes the nuclear localization signal and a beta subunit which docks the complex at nucleoporins. Alternate splicing of this gene results in two transcript variants encoding different proteins. [provided by RefSeq, Jul 2008] |
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| Gene Information | |||||||||||
| Type | Protein coding | ||||||||||
| Genomic Location | Chromosome 20:8650349-8694889 | ||||||||||
| Strand | Reverse strand | ||||||||||
| Band | |||||||||||
| Transcripts |
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| Interactions | |||||||||||
| Number of Interactions |
This gene and/or its encoded proteins are associated with 0 experimentally validated interaction(s) in this database.
They are also associated with 31 interaction(s) predicted by orthology.
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| Gene Ontology | |||||||||||
Molecular Function |
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| Biological Process |
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| Cellular Component |
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| Orthologs | |||||||||||
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Species
Homo sapiens
Mus musculus
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Gene ID
Gene Order
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| Pathway Predictions based on Human Orthology Data | |||||||||||
| NETPATH | |||||||||||
| REACTOME |
Tristetraprolin (TTP) destabilizes mRNA pathway
Regulation of mRNA stability by proteins that bind AU-rich elements pathway
Gene Expression pathway
Regulation of mRNA stability by proteins that bind AU-rich elements pathway
Tristetraprolin (TTP) destabilizes mRNA pathway
Gene Expression pathway
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| KEGG | |||||||||||
| INOH | |||||||||||
| PID NCI | |||||||||||
| Cross-References | |||||||||||
| SwissProt | |||||||||||
| TrEMBL | F1MMY6 Q7YS23 | ||||||||||
| UniProt Splice Variant | |||||||||||
| Entrez Gene | 767620 | ||||||||||
| UniGene | Bt.88395 | ||||||||||
| RefSeq | NM_001076540 | ||||||||||
| HUGO | |||||||||||
| OMIM | |||||||||||
| CCDS | |||||||||||
| HPRD | |||||||||||
| IMGT | |||||||||||
| EMBL | AY298813 DAAA02050012 DAAA02050013 DAAA02050014 | ||||||||||
| GenPept | AAP69669 | ||||||||||
| RNA Seq Atlas | 767620 | ||||||||||