Version 5.4
Bos taurus Gene: TET1
Summary
InnateDB Gene IDBG-629294.3
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol TET1
Gene Name Uncharacterized protein
Synonyms
Species Bos taurus
Ensembl Gene ENSBTAG00000037756
Encoded Proteins
IDBP-680712
tet methylcytosine dioxygenase 1
IDBP-680718
tet methylcytosine dioxygenase 1
IDBP-680722
tet methylcytosine dioxygenase 1
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000138336:
Gene Information
Type Protein coding
Genomic Location Chromosome 28:25073149-25191276
Strand Forward strand
Band
Transcripts
ENSBTAT00000010614 ENSBTAP00000010614
ENSBTAT00000063481 ENSBTAP00000054019
ENSBTAT00000053810 ENSBTAP00000051065
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 0 experimentally validated interaction(s) in this database.
They are also associated with 9 interaction(s) predicted by orthology.
Predicted by orthology
Total 9 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0003677 DNA binding
GO:0005506 iron ion binding
GO:0008270 zinc ion binding
GO:0043566 structure-specific DNA binding
GO:0070579 methylcytosine dioxygenase activity
Biological Process
GO:0001826 inner cell mass cell differentiation
GO:0044030 regulation of DNA methylation
GO:0080111 DNA demethylation
GO:0090310 negative regulation of methylation-dependent chromatin silencing
Cellular Component
GO:0005634 nucleus
Orthologs
Species
Homo sapiens
Mus musculus
Gene ID
Gene Order
ENSG00000138336
View Gene Order
ENSMUSG00000047146
View Gene Order
Pathway Predictions based on Human Orthology Data
NETPATH
REACTOME
REACT_200682
TET1,2,3 and TDG demethylate DNA pathway
REACT_200857
Epigenetic regulation of gene expression pathway
REACT_71
Gene Expression pathway
REACT_205737
Epigenetic regulation of gene expression pathway
REACT_223022
TET1,2,3 and TDG demethylate DNA pathway
REACT_233572
Gene Expression pathway
KEGG
INOH
PID NCI
Cross-References
SwissProt
TrEMBL F1MGK2
UniProt Splice Variant
Entrez Gene
UniGene
RefSeq
HUGO HGNC:29484
OMIM
CCDS
HPRD
IMGT
EMBL DAAA02061817 DAAA02061818 DAAA02061819 DAAA02061820 DAAA02061821 DAAA02061822
GenPept
RNA Seq Atlas

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca