Version 5.4
Bos taurus Gene: YKT6
Summary
InnateDB Gene IDBG-634353.3
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol YKT6
Gene Name Synaptobrevin homolog YKT6
Synonyms
Species Bos taurus
Ensembl Gene ENSBTAG00000000274
Encoded Proteins
IDBP-686128
Synaptobrevin homolog YKT6
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000106636:
This gene product is one of the SNARE recognition molecules implicated in vesicular transport between secretory compartments. It is a membrane associated, isoprenylated protein that functions at the endoplasmic reticulum-Golgi transport step. This protein is highly conserved from yeast to human and can functionally complement the loss of the yeast homolog in the yeast secretory pathway. [provided by RefSeq, Jul 2008]
Gene Information
Type Protein coding
Genomic Location Chromosome 4:77802985-77810784
Strand Reverse strand
Band
Transcripts
ENSBTAT00000000341 ENSBTAP00000000341
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 0 experimentally validated interaction(s) in this database.
They are also associated with 7 interaction(s) predicted by orthology.
Predicted by orthology
Total 7 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0005484 SNAP receptor activity
GO:0016740 transferase activity
GO:0019706 protein-cysteine S-palmitoyltransferase activity
Biological Process
GO:0006810 transport
GO:0006888 ER to Golgi vesicle-mediated transport
GO:0006903 vesicle targeting
GO:0006904 vesicle docking involved in exocytosis
GO:0008152 metabolic process
GO:0015031 protein transport
GO:0016192 vesicle-mediated transport
GO:0042147 retrograde transport, endosome to Golgi
Cellular Component
GO:0000139 Golgi membrane
GO:0005737 cytoplasm
GO:0005739 mitochondrion
GO:0005768 endosome
GO:0005783 endoplasmic reticulum
GO:0005794 Golgi apparatus
GO:0005829 cytosol
GO:0005887 integral component of plasma membrane
GO:0016020 membrane
GO:0016021 integral component of membrane
GO:0030659 cytoplasmic vesicle membrane
GO:0031410 cytoplasmic vesicle
GO:0070062 extracellular vesicular exosome
Orthologs
Species
Homo sapiens
Mus musculus
Gene ID
Gene Order
ENSG00000106636
View Gene Order
ENSMUSG00000002741
View Gene Order
Pathway Predictions based on Human Orthology Data
NETPATH
REACTOME
KEGG
hsa04130
SNARE interactions in vesicular transport pathway
mmu04130
SNARE interactions in vesicular transport pathway
INOH
PID NCI
Cross-References
SwissProt Q3T000
TrEMBL
UniProt Splice Variant
Entrez Gene 507409
UniGene Bt.87353 Bt.89424
RefSeq NM_001035047
HUGO
OMIM
CCDS
HPRD
IMGT
EMBL BC102627
GenPept AAI02628
RNA Seq Atlas 507409

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca