Version 5.4
Bos taurus Gene: RNPC3
Summary
InnateDB Gene IDBG-635989.2
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol RNPC3
Gene Name RNA-binding protein 40
Synonyms
Species Bos taurus
Ensembl Gene ENSBTAG00000019091
Encoded Proteins
IDBP-687883
RNA-binding protein 40
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000185946:
Two types of spliceosomes catalyze splicing of pre-mRNAs. The major U2-type spliceosome is found in all eukaryotes and removes U2-type introns, which represent more than 99% of pre-mRNA introns. The minor U12-type spliceosome is found in some eukaryotes and removes U12-type introns, which are rare and have distinct splice consensus signals. The U12-type spliceosome consists of several small nuclear RNAs and associated proteins. This gene encodes a 65K protein that is a component of the U12-type spliceosome. This protein contains two RNA recognition motifs (RRMs), suggesting that it may contact one of the small nuclear RNAs of the minor spliceosome. [provided by RefSeq, Jul 2008]
Gene Information
Type Protein coding
Genomic Location Chromosome 3:39998006-40025400
Strand Reverse strand
Band
Transcripts
ENSBTAT00000025416 ENSBTAP00000025416
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 0 experimentally validated interaction(s) in this database.
They are also associated with 7 interaction(s) predicted by orthology.
Predicted by orthology
Total 7 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0000166 nucleotide binding
GO:0003676 nucleic acid binding
Biological Process
Cellular Component
GO:0005634 nucleus
GO:0005689 U12-type spliceosomal complex
Orthologs
Species
Homo sapiens
Mus musculus
Gene ID
Gene Order
ENSG00000185946
View Gene Order
ENSMUSG00000027981
View Gene Order
Cross-References
SwissProt
TrEMBL F1MJQ8
UniProt Splice Variant
Entrez Gene 768060
UniGene Bt.6645
RefSeq NM_001077117
HUGO HGNC:18666
OMIM
CCDS
HPRD
IMGT
EMBL DAAA02007691
GenPept
RNA Seq Atlas 768060

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca