Bos taurus Gene: TRAF1 | |||||||||||||
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Summary | |||||||||||||
InnateDB Gene | IDBG-638832.3 | ||||||||||||
Last Modified | 2014-10-13 [Report errors or provide feedback] | ||||||||||||
Gene Symbol | TRAF1 | ||||||||||||
Gene Name | TNF receptor-associated factor 1 | ||||||||||||
Synonyms | |||||||||||||
Species | Bos taurus | ||||||||||||
Ensembl Gene | ENSBTAG00000003012 | ||||||||||||
Encoded Proteins |
TNF receptor-associated factor 1
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Protein Structure | |||||||||||||
Useful resources | Stemformatics EHFPI ImmGen | ||||||||||||
InnateDB Annotation from Orthologs | |||||||||||||
Summary |
[Homo sapiens] TRAF1 is a positive regulator of the NF-kappaB alternative pathway.
[Homo sapiens] TRAF1 mediates both the CD30 signaling-dependent and independent NF-kappaB activation, which prevents lymphoma cells from spontaneous and induced apoptosis.
[Homo sapiens] TRAF1 phosphorylation by the ubiquitously expressed kinase PKN1 plays a critical role in the negative regulation of tonic activity of JNK and NF-kappaB signalling pathways.
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Entrez Gene | |||||||||||||
Summary |
This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000056558:
The protein encoded by this gene is a member of the TNF receptor (TNFR) associated factor (TRAF) protein family. TRAF proteins associate with, and mediate the signal transduction from various receptors of the TNFR superfamily. This protein and TRAF2 form a heterodimeric complex, which is required for TNF-alpha-mediated activation of MAPK8/JNK and NF-kappaB. The protein complex formed by this protein and TRAF2 also interacts with inhibitor-of-apoptosis proteins (IAPs), and thus mediates the anti-apoptotic signals from TNF receptors. The expression of this protein can be induced by Epstein-Barr virus (EBV). EBV infection membrane protein 1 (LMP1) is found to interact with this and other TRAF proteins; this interaction is thought to link LMP1-mediated B lymphocyte transformation to the signal transduction from TNFR family receptors. Three transcript variants encoding two different isoforms have been found for this gene. [provided by RefSeq, Jul 2010] |
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Gene Information | |||||||||||||
Type | Protein coding | ||||||||||||
Genomic Location | Chromosome 8:112194564-112214586 | ||||||||||||
Strand | Reverse strand | ||||||||||||
Band | |||||||||||||
Transcripts |
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Interactions | |||||||||||||
Number of Interactions |
This gene and/or its encoded proteins are associated with 0 experimentally validated interaction(s) in this database.
They are also associated with 97 interaction(s) predicted by orthology.
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Gene Ontology | |||||||||||||
Molecular Function |
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Biological Process |
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Cellular Component |
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Orthologs | |||||||||||||
Species
Homo sapiens
Mus musculus
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Gene ID
Gene Order
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Pathway Predictions based on Human Orthology Data | |||||||||||||
NETPATH |
TNFalpha pathway
RANKL pathway
TWEAK pathway
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REACTOME | |||||||||||||
KEGG |
Small cell lung cancer pathway
Pathways in cancer pathway
Small cell lung cancer pathway
Pathways in cancer pathway
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INOH | |||||||||||||
PID NCI |
CD40/CD40L signaling
TNF receptor signaling pathway
HIV-1 Nef: Negative effector of Fas and TNF-alpha
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Cross-References | |||||||||||||
SwissProt | |||||||||||||
TrEMBL | E1BMI8 | ||||||||||||
UniProt Splice Variant | |||||||||||||
Entrez Gene | 540944 | ||||||||||||
UniGene | Bt.106228 Bt.42593 | ||||||||||||
RefSeq | NM_001192801 XM_005210594 XM_005210595 XM_005210596 XM_005210597 XM_005210598 | ||||||||||||
HUGO | HGNC:12031 | ||||||||||||
OMIM | |||||||||||||
CCDS | |||||||||||||
HPRD | |||||||||||||
IMGT | |||||||||||||
EMBL | DAAA02024787 | ||||||||||||
GenPept | |||||||||||||
RNA Seq Atlas | 540944 | ||||||||||||