Version 5.4
Bos taurus Gene: SMCHD1
Summary
InnateDB Gene IDBG-644160.3
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol SMCHD1
Gene Name structural maintenance of chromosomes flexible hinge domain-containing protein 1
Synonyms
Species Bos taurus
Ensembl Gene ENSBTAG00000003354
Encoded Proteins
IDBP-696787
structural maintenance of chromosomes flexible hinge domain containing 1
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000101596:
This gene encodes a protein which contains a hinge region domain found in members of the SMC (structural maintenance of chromosomes) protein family. [provided by RefSeq, Dec 2011]
Gene Information
Type Protein coding
Genomic Location Chromosome 24:37348582-37467285
Strand Forward strand
Band
Transcripts
ENSBTAT00000003904 ENSBTAP00000003904
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 0 experimentally validated interaction(s) in this database.
They are also associated with 8 interaction(s) predicted by orthology.
Predicted by orthology
Total 8 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0005515 protein binding
GO:0005524 ATP binding
Biological Process
GO:0009048 dosage compensation by inactivation of X chromosome
GO:0051276 chromosome organization
GO:0060821 inactivation of X chromosome by DNA methylation
Cellular Component
GO:0001740 Barr body
GO:0005694 chromosome
Orthologs
Species
Homo sapiens
Mus musculus
Gene ID
Gene Order
ENSG00000101596
View Gene Order
ENSMUSG00000024054
View Gene Order
Cross-References
SwissProt
TrEMBL F6RF21
UniProt Splice Variant
Entrez Gene 537894
UniGene Bt.3161
RefSeq NM_001206400 XM_005224244
HUGO HGNC:29090
OMIM
CCDS
HPRD
IMGT
EMBL DAAA02056714 DAAA02056715 DAAA02056716
GenPept
RNA Seq Atlas 537894

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca