Version 5.4
Mus musculus Gene: Smchd1
Summary
InnateDB Gene IDBG-196873.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Smchd1
Gene Name SMC hinge domain containing 1
Synonyms 4931400A14Rik; AW554188; mKIAA0650; MommeD1
Species Mus musculus
Ensembl Gene ENSMUSG00000024054
Encoded Proteins
IDBP-532421
SMC hinge domain containing 1
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000101596:
This gene encodes a protein which contains a hinge region domain found in members of the SMC (structural maintenance of chromosomes) protein family. [provided by RefSeq, Dec 2011]
Gene Information
Type Protein coding
Genomic Location Chromosome 17:71344489-71475343
Strand Reverse strand
Band E1.3
Transcripts
ENSMUST00000127430 ENSMUSP00000121835
ENSMUST00000138193
ENSMUST00000147111
ENSMUST00000136071
ENSMUST00000182049
ENSMUST00000182205
ENSMUST00000182107
ENSMUST00000183046
ENSMUST00000182747
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 4 experimentally validated interaction(s) in this database.
They are also associated with 8 interaction(s) predicted by orthology.
Experimentally validated
Total 4 [view]
Protein-Protein 4 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Predicted by orthology
Total 8 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0005515 protein binding
GO:0005524 ATP binding
Biological Process
GO:0009048 dosage compensation by inactivation of X chromosome
GO:0051276 chromosome organization
GO:0060821 inactivation of X chromosome by DNA methylation
Cellular Component
GO:0001740 Barr body
GO:0005694 chromosome
Orthologs
Species
Homo sapiens
Bos taurus
Gene ID
Gene Order
ENSG00000101596
View Gene Order
ENSBTAG00000003354
Not yet available
Cross-References
SwissProt
TrEMBL
UniProt Splice Variant
Entrez Gene
UniGene Mm.194450 Mm.401917 Mm.413403
RefSeq NM_028887 XM_006525030
OMIM
CCDS CCDS28958
HPRD
IMGT
MGI ID
MGI Symbol
EMBL
GenPept
RNA Seq Atlas

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca