Bos taurus Gene: ACTN1 | |||||||||||||||||||||||||||
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Summary | |||||||||||||||||||||||||||
InnateDB Gene | IDBG-646802.3 | ||||||||||||||||||||||||||
Last Modified | 2014-10-13 [Report errors or provide feedback] | ||||||||||||||||||||||||||
Gene Symbol | ACTN1 | ||||||||||||||||||||||||||
Gene Name | Alpha-actinin-1 | ||||||||||||||||||||||||||
Synonyms | |||||||||||||||||||||||||||
Species | Bos taurus | ||||||||||||||||||||||||||
Ensembl Gene | ENSBTAG00000018255 | ||||||||||||||||||||||||||
Encoded Proteins |
Alpha-actinin-1
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Protein Structure | |||||||||||||||||||||||||||
Useful resources | Stemformatics EHFPI ImmGen | ||||||||||||||||||||||||||
Entrez Gene | |||||||||||||||||||||||||||
Summary |
This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000072110:
Alpha actinins belong to the spectrin gene superfamily which represents a diverse group of cytoskeletal proteins, including the alpha and beta spectrins and dystrophins. Alpha actinin is an actin-binding protein with multiple roles in different cell types. In nonmuscle cells, the cytoskeletal isoform is found along microfilament bundles and adherens-type junctions, where it is involved in binding actin to the membrane. In contrast, skeletal, cardiac, and smooth muscle isoforms are localized to the Z-disc and analogous dense bodies, where they help anchor the myofibrillar actin filaments. This gene encodes a nonmuscle, cytoskeletal, alpha actinin isoform and maps to the same site as the structurally similar erythroid beta spectrin gene. Three transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Jul 2008] |
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Gene Information | |||||||||||||||||||||||||||
Type | Protein coding | ||||||||||||||||||||||||||
Genomic Location | Chromosome 10:81023526-81121590 | ||||||||||||||||||||||||||
Strand | Reverse strand | ||||||||||||||||||||||||||
Band | |||||||||||||||||||||||||||
Transcripts |
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Interactions | |||||||||||||||||||||||||||
Number of Interactions |
This gene and/or its encoded proteins are associated with 0 experimentally validated interaction(s) in this database.
They are also associated with 80 interaction(s) predicted by orthology.
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Gene Ontology | |||||||||||||||||||||||||||
Molecular Function |
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Biological Process |
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Cellular Component |
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Orthologs | |||||||||||||||||||||||||||
Species
Homo sapiens
Mus musculus
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Gene ID
Gene Order
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Pathways | |||||||||||||||||||||||||||
NETPATH | |||||||||||||||||||||||||||
REACTOME |
Platelet degranulation pathway
Non-integrin membrane-ECM interactions pathway
Regulation of cytoskeletal remodeling and cell spreading by IPP complex components pathway
Extracellular matrix organization pathway
Nephrin interactions pathway
Hemostasis pathway
Platelet activation, signaling and aggregation pathway
Response to elevated platelet cytosolic Ca2+ pathway
Cell junction organization pathway
Cell-Cell communication pathway
Cell-extracellular matrix interactions pathway
Syndecan interactions pathway
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KEGG | |||||||||||||||||||||||||||
INOH | |||||||||||||||||||||||||||
PID NCI | |||||||||||||||||||||||||||
Pathway Predictions based on Human Orthology Data | |||||||||||||||||||||||||||
NETPATH |
EGFR1 pathway
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REACTOME |
Platelet degranulation pathway
Response to elevated platelet cytosolic Ca2+ pathway
Nephrin interactions pathway
Regulation of cytoskeletal remodeling and cell spreading by IPP complex components pathway
Cell-extracellular matrix interactions pathway
Cell-Cell communication pathway
Extracellular matrix organization pathway
Cell junction organization pathway
Syndecan interactions pathway
Platelet activation, signaling and aggregation pathway
Non-integrin membrane-ECM interactions pathway
Hemostasis pathway
Platelet degranulation pathway
Syndecan interactions pathway
Hemostasis pathway
Nephrin interactions pathway
Extracellular matrix organization pathway
Platelet activation, signaling and aggregation pathway
Cell-extracellular matrix interactions pathway
Non-integrin membrane-ECM interactions pathway
Response to elevated platelet cytosolic Ca2+ pathway
Cell junction organization pathway
Cell-Cell communication pathway
Regulation of cytoskeletal remodeling and cell spreading by IPP complex components pathway
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KEGG |
Regulation of actin cytoskeleton pathway
Adherens junction pathway
Leukocyte transendothelial migration pathway
Tight junction pathway
Focal adhesion pathway
Systemic lupus erythematosus pathway
Arrhythmogenic right ventricular cardiomyopathy (ARVC) pathway
Amoebiasis pathway
Tight junction pathway
Regulation of actin cytoskeleton pathway
Adherens junction pathway
Leukocyte transendothelial migration pathway
Focal adhesion pathway
Systemic lupus erythematosus pathway
Arrhythmogenic right ventricular cardiomyopathy (ARVC) pathway
Amoebiasis pathway
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INOH | |||||||||||||||||||||||||||
PID NCI |
Signaling events mediated by focal adhesion kinase
Integrin-linked kinase signaling
Syndecan-4-mediated signaling events
Stabilization and expansion of the E-cadherin adherens junction
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Cross-References | |||||||||||||||||||||||||||
SwissProt | |||||||||||||||||||||||||||
TrEMBL | |||||||||||||||||||||||||||
UniProt Splice Variant | |||||||||||||||||||||||||||
Entrez Gene | |||||||||||||||||||||||||||
UniGene | Bt.57772 | ||||||||||||||||||||||||||
RefSeq | NM_001035351 XM_005211978 | ||||||||||||||||||||||||||
HUGO | |||||||||||||||||||||||||||
OMIM | |||||||||||||||||||||||||||
CCDS | |||||||||||||||||||||||||||
HPRD | |||||||||||||||||||||||||||
IMGT | |||||||||||||||||||||||||||
EMBL | |||||||||||||||||||||||||||
GenPept | |||||||||||||||||||||||||||
RNA Seq Atlas | |||||||||||||||||||||||||||