Version 5.4
Bos taurus Gene: SMOC1
Summary
InnateDB Gene IDBG-646812.3
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol SMOC1
Gene Name SPARC-related modular calcium-binding protein 1 precursor
Synonyms
Species Bos taurus
Ensembl Gene ENSBTAG00000030599
Encoded Proteins
IDBP-699648
SPARC-related modular calcium-binding protein 1
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000198732:
This gene encodes a multi-domain secreted protein that may have a critical role in ocular and limb development. Mutations in this gene are associated with microphthalmia and limb anomalies. Alternatively spliced transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Mar 2011]
Gene Information
Type Protein coding
Genomic Location Chromosome 10:81957653-82102222
Strand Forward strand
Band
Transcripts
ENSBTAT00000043227 ENSBTAP00000040815
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 0 experimentally validated interaction(s) in this database.
They are also associated with 1 interaction(s) predicted by orthology.
Predicted by orthology
Total 1 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0005509 calcium ion binding
GO:0005515 protein binding
GO:0050840 extracellular matrix binding
Biological Process
GO:0001654 eye development
GO:0007165 signal transduction
GO:0010811 positive regulation of cell-substrate adhesion
GO:0030198 extracellular matrix organization
GO:0045667 regulation of osteoblast differentiation
GO:0060173 limb development
Cellular Component
GO:0005578 proteinaceous extracellular matrix
GO:0005604 basement membrane
Orthologs
Species
Homo sapiens
Mus musculus
Gene ID
Gene Order
ENSG00000198732
View Gene Order
ENSMUSG00000021136
View Gene Order
Cross-References
SwissProt
TrEMBL A0JNE0
UniProt Splice Variant
Entrez Gene 508379
UniGene Bt.102148
RefSeq NM_001079771 XM_005211951
HUGO
OMIM
CCDS
HPRD
IMGT
EMBL BC126639 DAAA02029516
GenPept AAI26640
RNA Seq Atlas 508379

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca