Version 5.4
Mus musculus Gene: Smoc1
Summary
InnateDB Gene IDBG-154151.7
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Smoc1
Gene Name SPARC related modular calcium binding 1
Synonyms 2600002F22Rik; AI848508; SRG
Species Mus musculus
Ensembl Gene ENSMUSG00000021136
Encoded Proteins
IDBP-154153
SPARC related modular calcium binding 1
IDBP-260471
SPARC related modular calcium binding 1
IDBP-537131
SPARC related modular calcium binding 1
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000198732:
This gene encodes a multi-domain secreted protein that may have a critical role in ocular and limb development. Mutations in this gene are associated with microphthalmia and limb anomalies. Alternatively spliced transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Mar 2011]
Gene Information
Type Protein coding
Genomic Location Chromosome 12:81026808-81186414
Strand Forward strand
Band D1
Transcripts
ENSMUST00000021564 ENSMUSP00000021564
ENSMUST00000110347 ENSMUSP00000105976
ENSMUST00000129362 ENSMUSP00000122858
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 0 experimentally validated interaction(s) in this database.
They are also associated with 1 interaction(s) predicted by orthology.
Predicted by orthology
Total 1 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0005509 calcium ion binding
GO:0005515 protein binding
GO:0050840 extracellular matrix binding
Biological Process
GO:0001654 eye development
GO:0007165 signal transduction
GO:0010811 positive regulation of cell-substrate adhesion
GO:0030154 cell differentiation
GO:0030198 extracellular matrix organization
GO:0045667 regulation of osteoblast differentiation
GO:0060173 limb development
Cellular Component
GO:0005578 proteinaceous extracellular matrix
GO:0005604 basement membrane
Orthologs
Species
Homo sapiens
Bos taurus
Gene ID
Gene Order
ENSG00000198732
View Gene Order
ENSBTAG00000030599
Not yet available
Cross-References
SwissProt
TrEMBL
UniProt Splice Variant
Entrez Gene
UniGene Mm.273295 Mm.408719
RefSeq NM_001146217 NM_022316 XM_006516135
OMIM
CCDS CCDS26017 CCDS49102
HPRD
IMGT
MGI ID
MGI Symbol
EMBL
GenPept
RNA Seq Atlas

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca