Version 5.4
Bos taurus Gene: ZBTB38
Summary
InnateDB Gene IDBG-647325.3
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol ZBTB38
Gene Name Uncharacterized protein
Synonyms
Species Bos taurus
Ensembl Gene ENSBTAG00000040061
Encoded Proteins
IDBP-700158
zinc finger and BTB domain containing 38
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000177311:
The protein encoded by this gene is a zinc finger transcriptional activator that binds methylated DNA. The encoded protein can form homodimers or heterodimers through the zinc finger domains. In mouse, inhibition of this protein has been associated with apoptosis in some cell types. [provided by RefSeq, Jun 2010]
Gene Information
Type Protein coding
Genomic Location Chromosome 1:128532757-128536371
Strand Reverse strand
Band
Transcripts
ENSBTAT00000052575 ENSBTAP00000050483
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 0 experimentally validated interaction(s) in this database.
They are also associated with 3 interaction(s) predicted by orthology.
Predicted by orthology
Total 3 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0003676 nucleic acid binding
GO:0005515 protein binding
GO:0008327 methyl-CpG binding
GO:0042803 protein homodimerization activity
GO:0046872 metal ion binding
Biological Process
GO:0045892 negative regulation of transcription, DNA-templated
Cellular Component
GO:0005634 nucleus
GO:0072562 blood microparticle
Orthologs
Species
Homo sapiens
Mus musculus
Gene ID
Gene Order
ENSG00000177311
View Gene Order
ENSMUSG00000040433
View Gene Order
Cross-References
SwissProt
TrEMBL F1ME21
UniProt Splice Variant
Entrez Gene 539843
UniGene
RefSeq XM_002685040 XM_005195970 XM_005195971 XM_005195972 XM_005195973 XM_005195974 XM_005195975 XM_005201901 XM_005201902 XM_005201903 XM_005201904 XM_005201905 XM_005201906 XM_589799
HUGO HGNC:26636
OMIM
CCDS
HPRD
IMGT
EMBL DAAA02002894
GenPept
RNA Seq Atlas 539843
Transcript Frequencies
Tag Count based mRNA-Abundances across 87 different Tissues (TPM).

Based on Data from Bovine Gene Atlas

Tag Count based mRNA-Abundances across 87 different Tissues (TPM)

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If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca