Version 5.4
Homo sapiens Gene: RBFOX3
Summary
InnateDB Gene IDBG-71149.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol RBFOX3
Gene Name RNA binding protein, fox-1 homolog (C. elegans) 3
Synonyms
Species Homo sapiens
Ensembl Gene ENSG00000167281
Encoded Proteins
IDBP-758995
IDBP-759985
IDBP-760787
IDBP-760992
IDBP-760710
IDBP-758421
IDBP-759378
IDBP-763499
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary Currently no Entrez Summary Available. You might want to check the Summary Sections of the Orthologs.
Gene Information
Type Protein coding
Genomic Location Chromosome 17:79089345-79516148
Strand Reverse strand
Band q25.3
Transcripts
ENST00000580508 ENSP00000467872
ENST00000582894 ENSP00000468693
ENST00000578887
ENST00000580155 ENSP00000463653
ENST00000584778 ENSP00000462007
ENST00000582880 ENSP00000465367
ENST00000582139 ENSP00000464946
ENST00000583458 ENSP00000464186
ENST00000582344
ENST00000582043 ENSP00000463964
ENST00000578998
ENST00000581393
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 0 experimentally validated interaction(s) in this database.
They are also associated with 1 interaction(s) predicted by orthology.
Predicted by orthology
Total 1 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0000166 nucleotide binding
GO:0003676 nucleic acid binding
GO:0003677 DNA binding
GO:0003723 RNA binding
GO:0005515 protein binding
Biological Process
GO:0000381 regulation of alternative mRNA splicing, via spliceosome
GO:0006397 mRNA processing
GO:0008380 RNA splicing
GO:0043484 regulation of RNA splicing
Cellular Component
GO:0005622 intracellular
GO:0005634 nucleus
GO:0005737 cytoplasm
GO:0043025 neuronal cell body
GO:0043204 perikaryon
Orthologs
Species
Mus musculus
Bos taurus
Gene ID
Gene Order
ENSMUSG00000025576
View Gene Order
ENSBTAG00000006280
Not yet available
Cross-References
SwissProt
TrEMBL J3QQZ2
UniProt Splice Variant
Entrez Gene 146713
UniGene Hs.135229 Hs.668802
RefSeq NM_001082575 XM_006721713 XM_006721714 XM_006721715 XM_006721718
HUGO HGNC:27097
OMIM
CCDS CCDS45805
HPRD 18730
IMGT
EMBL AC020689 AC021534 AC027824 AC055858 AC073624 AC142247
GenPept
RNA Seq Atlas 102724692 102725405 146713

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca