Version 5.4
| Homo sapiens Gene: RBM39 | |||||||||||||||||||||||
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| Summary | |||||||||||||||||||||||
| InnateDB Gene | IDBG-71434.6 | ||||||||||||||||||||||
| Last Modified | 2014-10-13 [Report errors or provide feedback] | ||||||||||||||||||||||
| Gene Symbol | RBM39 | ||||||||||||||||||||||
| Gene Name | RNA binding motif protein 39 | ||||||||||||||||||||||
| Synonyms | CAPER; CAPERalpha; FSAP59; HCC1; RNPC2 | ||||||||||||||||||||||
| Species | Homo sapiens | ||||||||||||||||||||||
| Ensembl Gene | ENSG00000131051 | ||||||||||||||||||||||
| Encoded Proteins |
RNA binding motif protein 39
RNA binding motif protein 39
RNA binding motif protein 39
RNA binding motif protein 39
RNA binding motif protein 39
RNA binding motif protein 39
RNA binding motif protein 39
RNA binding motif protein 39
RNA binding motif protein 39
RNA binding motif protein 39
RNA binding motif protein 39
RNA binding motif protein 39
RNA binding motif protein 39
RNA binding motif protein 39
RNA binding motif protein 39
RNA binding motif protein 39
RNA binding motif protein 39
RNA binding motif protein 39
RNA binding motif protein 39
RNA binding motif protein 39
RNA binding motif protein 39
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| Protein Structure | |||||||||||||||||||||||
| Useful resources | Stemformatics EHFPI ImmGen | ||||||||||||||||||||||
| Entrez Gene | |||||||||||||||||||||||
| Summary |
This gene encodes a member of the U2AF65 family of proteins. The encoded protein is found in the nucleus, where it co-localizes with core spliceosomal proteins. It has been shown to play a role in both steroid hormone receptor-mediated transcription and alternative splicing, and it is also a transcriptional coregulator of the viral oncoprotein v-Rel. Multiple transcript variants have been observed for this gene. A related pseudogene has been identified on chromosome X. [provided by RefSeq, Aug 2011] |
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| Gene Information | |||||||||||||||||||||||
| Type | Protein coding | ||||||||||||||||||||||
| Genomic Location | Chromosome 20:35703609-35742312 | ||||||||||||||||||||||
| Strand | Reverse strand | ||||||||||||||||||||||
| Band | q11.22 | ||||||||||||||||||||||
| Transcripts | |||||||||||||||||||||||
| Interactions | |||||||||||||||||||||||
| Number of Interactions |
This gene and/or its encoded proteins are associated with 152 experimentally validated interaction(s) in this database.
They are also associated with 8 interaction(s) predicted by orthology.
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| Gene Ontology | |||||||||||||||||||||||
Molecular Function |
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| Biological Process |
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| Cellular Component |
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| Orthologs | |||||||||||||||||||||||
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Species
Mus musculus
Bos taurus
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Gene ID
Gene Order
Not yet available
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| Cross-References | |||||||||||||||||||||||
| SwissProt | |||||||||||||||||||||||
| TrEMBL | |||||||||||||||||||||||
| UniProt Splice Variant | |||||||||||||||||||||||
| Entrez Gene | |||||||||||||||||||||||
| UniGene | Hs.282901 Hs.599616 Hs.607178 Hs.610806 Hs.706258 | ||||||||||||||||||||||
| RefSeq | NM_001242599 NM_001242600 NM_004902 NM_184234 XM_006723892 XM_006723893 | ||||||||||||||||||||||
| HUGO | |||||||||||||||||||||||
| OMIM | |||||||||||||||||||||||
| CCDS | CCDS13265 CCDS13266 CCDS56186 | ||||||||||||||||||||||
| HPRD | 09201 | ||||||||||||||||||||||
| IMGT | |||||||||||||||||||||||
| EMBL | |||||||||||||||||||||||
| GenPept | |||||||||||||||||||||||
| RNA Seq Atlas | |||||||||||||||||||||||