Version 5.4
Homo sapiens Gene: RBM38
Summary
InnateDB Gene IDBG-82191.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol RBM38
Gene Name RNA binding motif protein 38
Synonyms
Species Homo sapiens
Ensembl Gene ENSG00000132819
Encoded Proteins
IDBP-82193
RNA binding motif protein 38
IDBP-82195
RNA binding motif protein 38
IDBP-82197
RNA binding motif protein 38
IDBP-82201
RNA binding motif protein 38
IDBP-379197
RNA binding motif protein 38
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary Currently no Entrez Summary Available. You might want to check the Summary Sections of the Orthologs.
Gene Information
Type Protein coding
Genomic Location Chromosome 20:57391407-57409333
Strand Forward strand
Band q13.31
Transcripts
ENST00000342690 ENSP00000343718
ENST00000344785 ENSP00000345248
ENST00000356208 ENSP00000348538
ENST00000371219 ENSP00000360263
ENST00000440234 ENSP00000407848
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 2 experimentally validated interaction(s) in this database.
They are also associated with 1 interaction(s) predicted by orthology.
Experimentally validated
Total 2 [view]
Protein-Protein 2 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Predicted by orthology
Total 1 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0000166 nucleotide binding
GO:0003676 nucleic acid binding
GO:0003729 mRNA binding
GO:0003730 mRNA 3'-UTR binding
GO:0044822 poly(A) RNA binding
Biological Process
GO:0006397 mRNA processing
GO:0006977 DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest
GO:0006978 DNA damage response, signal transduction by p53 class mediator resulting in transcription of p21 class mediator
GO:0007049 cell cycle
GO:0007050 cell cycle arrest
GO:0008285 negative regulation of cell proliferation
GO:0008380 RNA splicing
GO:0010830 regulation of myotube differentiation
GO:0030154 cell differentiation
GO:0043484 regulation of RNA splicing
GO:0070935 3'-UTR-mediated mRNA stabilization
Cellular Component
GO:0005634 nucleus
GO:0005829 cytosol
Orthologs
Species
Mus musculus
Bos taurus
Gene ID
Gene Order
ENSMUSG00000027510
View Gene Order
ENSBTAG00000008105
Not yet available
Cross-References
SwissProt
TrEMBL E9PSF1
UniProt Splice Variant
Entrez Gene 55544
UniGene
RefSeq NM_017495 NM_183425
HUGO HGNC:15818
OMIM 612428
CCDS CCDS46617 CCDS46618
HPRD 15268
IMGT
EMBL AL109955
GenPept
RNA Seq Atlas 55544

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca