Homo sapiens Gene: PDCD1 | |||||||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Summary | |||||||||||||||||||||||
InnateDB Gene | IDBG-85346.6 | ||||||||||||||||||||||
Last Modified | 2014-10-13 [Report errors or provide feedback] | ||||||||||||||||||||||
Gene Symbol | PDCD1 | ||||||||||||||||||||||
Gene Name | programmed cell death 1 | ||||||||||||||||||||||
Synonyms | CD279; hPD-1; hPD-l; hSLE1; PD-1; PD1; SLEB2 | ||||||||||||||||||||||
Species | Homo sapiens | ||||||||||||||||||||||
Ensembl Gene | ENSG00000188389 | ||||||||||||||||||||||
Encoded Proteins |
programmed cell death 1
programmed cell death 1
programmed cell death 1
|
||||||||||||||||||||||
Protein Structure | |||||||||||||||||||||||
Useful resources | Stemformatics EHFPI ImmGen | ||||||||||||||||||||||
InnateDB Annotation | |||||||||||||||||||||||
Summary |
PDCD1 mediates functional impairment of early immune responses during HCV infection by limiting STAT1 phosphorylation, which consequently inhibits IL12 expression in monocytes / macrophages.
PDCD1 expression in T cells is induced by IFNA stimulation and provides feedback inhibition of T cell activation. It is proposed that strong innate inflammatory response (i.e. IFNA secretion) cause an attenuated T cell response by PDCD1 in sustained immune reaction.
PDCD1 is a negative immunomodulator that is upregulated by Hepatitis C virus to deliver negative signaling to TLR-mediated pathways controlling expression of IL12, a key cytokine linking innate and adaptive immunity.
|
||||||||||||||||||||||
InnateDB Annotation from Orthologs | |||||||||||||||||||||||
Summary |
[Mus musculus] Pdcd1 expression in T cells is induced by Ifna stimulation and provides feedback inhibition of T cell activation. It is proposed that strong innate inflammatory response (i.e. Ifna secretion) cause an attenuated T cell response by Pdcd1 in sustained immune reaction.
[Mus musculus] Pdcd1 is a negative immunomodulator that is upregulated by Hepatitis C virus to deliver negative signaling to Tlr-mediated pathways controlling expression of Il12, a key cytokine linking innate and adaptive immunity.
|
||||||||||||||||||||||
Entrez Gene | |||||||||||||||||||||||
Summary |
This gene encodes a cell surface membrane protein of the immunoglobulin superfamily. This protein is expressed in pro-B-cells and is thought to play a role in their differentiation. In mice, expression of this gene is induced in the thymus when anti-CD3 antibodies are injected and large numbers of thymocytes undergo apoptosis. Mice deficient for this gene bred on a BALB/c background developed dilated cardiomyopathy and died from congestive heart failure. These studies suggest that this gene product may also be important in T cell function and contribute to the prevention of autoimmune diseases. [provided by RefSeq, Jul 2008] This gene encodes a cell surface membrane protein of the immunoglobulin superfamily. This protein is expressed in pro-B-cells and is thought to play a role in their differentiation. In mice, expression of this gene is induced in the thymus when anti-CD3 antibodies are injected and large numbers of thymocytes undergo apoptosis. Mice deficient for this gene bred on a BALB/c background developed dilated cardiomyopathy and died from congestive heart failure. These studies suggest that this gene product may also be important in T cell function and contribute to the prevention of autoimmune diseases. [provided by RefSeq, Jul 2008] |
||||||||||||||||||||||
Gene Information | |||||||||||||||||||||||
Type | Protein coding | ||||||||||||||||||||||
Genomic Location | Chromosome 2:241849881-241858908 | ||||||||||||||||||||||
Strand | Reverse strand | ||||||||||||||||||||||
Band | q37.3 | ||||||||||||||||||||||
Transcripts |
|
||||||||||||||||||||||
Interactions | |||||||||||||||||||||||
Number of Interactions |
This gene and/or its encoded proteins are associated with 10 experimentally validated interaction(s) in this database.
They are also associated with 5 interaction(s) predicted by orthology.
|
||||||||||||||||||||||
Gene Ontology | |||||||||||||||||||||||
Molecular Function |
|
||||||||||||||||||||||
Biological Process |
|
||||||||||||||||||||||
Cellular Component |
|
||||||||||||||||||||||
Orthologs | |||||||||||||||||||||||
Species
Mus musculus
Bos taurus
|
Gene ID
Gene Order
Not yet available
|
||||||||||||||||||||||
Pathways | |||||||||||||||||||||||
NETPATH | |||||||||||||||||||||||
REACTOME |
PD-1 signaling pathway
Costimulation by the CD28 family pathway
Adaptive Immune System pathway
Immune System pathway
|
||||||||||||||||||||||
KEGG |
Cell adhesion molecules (CAMs) pathway
T cell receptor signaling pathway pathway
|
||||||||||||||||||||||
INOH | |||||||||||||||||||||||
PID NCI | |||||||||||||||||||||||
Cross-References | |||||||||||||||||||||||
SwissProt | |||||||||||||||||||||||
TrEMBL | |||||||||||||||||||||||
UniProt Splice Variant | |||||||||||||||||||||||
Entrez Gene | |||||||||||||||||||||||
UniGene | Hs.158297 | ||||||||||||||||||||||
RefSeq | NM_005018 | ||||||||||||||||||||||
HUGO | |||||||||||||||||||||||
OMIM | |||||||||||||||||||||||
CCDS | CCDS33428 | ||||||||||||||||||||||
HPRD | 02590 | ||||||||||||||||||||||
IMGT | |||||||||||||||||||||||
EMBL | |||||||||||||||||||||||
GenPept | |||||||||||||||||||||||
RNA Seq Atlas | |||||||||||||||||||||||