Version 5.4
Homo sapiens Gene: ZGPAT
Summary
InnateDB Gene IDBG-87143.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol ZGPAT
Gene Name zinc finger, CCCH-type with G patch domain
Synonyms
Species Homo sapiens
Ensembl Gene ENSG00000197114
Encoded Proteins
IDBP-87147
zinc finger, CCCH-type with G patch domain
IDBP-87151
zinc finger, CCCH-type with G patch domain
IDBP-87153
zinc finger, CCCH-type with G patch domain
IDBP-87155
zinc finger, CCCH-type with G patch domain
IDBP-381107
zinc finger, CCCH-type with G patch domain
IDBP-381111
zinc finger, CCCH-type with G patch domain
IDBP-810907
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary Currently no Entrez Summary Available. You might want to check the Summary Sections of the Orthologs.
Gene Information
Type Protein coding
Genomic Location Chromosome 20:63707465-63736142
Strand Forward strand
Band q13.33
Transcripts
ENST00000355969 ENSP00000348242
ENST00000357119 ENSP00000349634
ENST00000369967 ENSP00000358984
ENST00000328969 ENSP00000332013
ENST00000448100 ENSP00000391176
ENST00000431125 ENSP00000403966
ENST00000477340
ENST00000490623 ENSP00000476393
ENST00000472711
ENST00000478385
ENST00000468235
ENST00000484569
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 18 experimentally validated interaction(s) in this database.
Experimentally validated
Total 18 [view]
Protein-Protein 18 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Gene Ontology

Molecular Function
Accession GO Term
GO:0003676 nucleic acid binding
GO:0003700 sequence-specific DNA binding transcription factor activity
GO:0005515 protein binding
GO:0043565 sequence-specific DNA binding
GO:0046872 metal ion binding
Biological Process
GO:0006351 transcription, DNA-templated
GO:0007175 negative regulation of epidermal growth factor-activated receptor activity
GO:0045892 negative regulation of transcription, DNA-templated
Cellular Component
GO:0005634 nucleus
Orthologs
Species
Mus musculus
Bos taurus
Gene ID
Gene Order
ENSMUSG00000027582
View Gene Order
ENSBTAG00000007498
Not yet available
Cross-References
SwissProt
TrEMBL
UniProt Splice Variant
Entrez Gene
UniGene Hs.11900 Hs.590868
RefSeq NM_001083113 NM_001195653 NM_001195654 NM_032527 NM_181485
HUGO
OMIM
CCDS CCDS13534 CCDS13535 CCDS56203
HPRD 15736
IMGT
EMBL
GenPept
RNA Seq Atlas

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca