Version 5.4
Homo sapiens Gene: VTI1B
Summary
InnateDB Gene IDBG-9964.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol VTI1B
Gene Name vesicle transport through interaction with t-SNAREs homolog 1B (yeast)
Synonyms v-SNARE; VTI1; VTI1-LIKE; vti1-rp1; VTI1L; VTI2
Species Homo sapiens
Ensembl Gene ENSG00000100568
Encoded Proteins
IDBP-9966
vesicle transport through interaction with t-SNAREs homolog 1B (yeast)
IDBP-588325
vesicle transport through interaction with t-SNAREs homolog 1B (yeast)
IDBP-595666
vesicle transport through interaction with t-SNAREs homolog 1B (yeast)
IDBP-596340
vesicle transport through interaction with t-SNAREs homolog 1B (yeast)
IDBP-589320
vesicle transport through interaction with t-SNAREs homolog 1B (yeast)
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary Currently no Entrez Summary Available. You might want to check the Summary Sections of the Orthologs.
Gene Information
Type Protein coding
Genomic Location Chromosome 14:67647075-67674831
Strand Reverse strand
Band q24.1
Transcripts
ENST00000216456 ENSP00000216456
ENST00000554659 ENSP00000450731
ENST00000554636 ENSP00000451661
ENST00000556461 ENSP00000451759
ENST00000553619
ENST00000555543 ENSP00000452366
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 9 experimentally validated interaction(s) in this database.
They are also associated with 3 interaction(s) predicted by orthology.
Experimentally validated
Total 9 [view]
Protein-Protein 9 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Predicted by orthology
Total 3 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0000149 SNARE binding
GO:0005515 protein binding
Biological Process
GO:0006886 intracellular protein transport
GO:0006904 vesicle docking involved in exocytosis
GO:0008283 cell proliferation
GO:0016192 vesicle-mediated transport
GO:0061025 membrane fusion
Cellular Component
GO:0005765 lysosomal membrane
GO:0005794 Golgi apparatus
GO:0008021 synaptic vesicle
GO:0016020 membrane
GO:0016021 integral component of membrane
GO:0031201 SNARE complex
GO:0031902 late endosome membrane
GO:0043025 neuronal cell body
GO:0048471 perinuclear region of cytoplasm
Orthologs
Species
Mus musculus
Bos taurus
Gene ID
Gene Order
ENSMUSG00000021124
View Gene Order
ENSBTAG00000001948
Not yet available
Pathways
NETPATH
REACTOME
KEGG
hsa04130
SNARE interactions in vesicular transport pathway
INOH
PID NCI
Cross-References
SwissProt
TrEMBL G3V5I2
UniProt Splice Variant
Entrez Gene 10490
UniGene Hs.678498 Hs.741177
RefSeq NM_006370
HUGO HGNC:17793
OMIM 603207
CCDS CCDS9786
HPRD 04440
IMGT
EMBL AL049779
GenPept
RNA Seq Atlas 10490

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca