Version 5.4
Mus musculus Gene: Hpcal1
Summary
InnateDB Gene IDBG-129809.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Hpcal1
Gene Name hippocalcin-like 1
Synonyms NVP-3; Nvp3; VILIP3; Vnsl3; Vsnl3
Species Mus musculus
Ensembl Gene ENSMUSG00000071379
Encoded Proteins
IDBP-129811
hippocalcin-like 1
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000115756:
The protein encoded by this gene is a member of neuron-specific calcium-binding proteins family found in the retina and brain. It is highly similar to human hippocalcin protein and nearly identical to the rat and mouse hippocalcin like-1 proteins. It may be involved in the calcium-dependent regulation of rhodopsin phosphorylation and may be of relevance for neuronal signalling in the central nervous system. Several alternatively spliced transcript variants encoding the same protein have been found for this gene. [provided by RefSeq, Apr 2012]
Gene Information
Type Protein coding
Genomic Location Chromosome 12:17690814-17791926
Strand Forward strand
Band A1.2
Transcripts
ENSMUST00000071858 ENSMUSP00000071756
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 4 experimentally validated interaction(s) in this database.
They are also associated with 6 interaction(s) predicted by orthology.
Experimentally validated
Total 4 [view]
Protein-Protein 3 [view]
Protein-DNA 1 [view]
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Predicted by orthology
Total 6 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0005509 calcium ion binding
GO:0005515 protein binding
Biological Process
GO:0007165 signal transduction
GO:0008150 biological_process
Cellular Component
GO:0005575 cellular_component
GO:0005578 proteinaceous extracellular matrix
GO:0070062 extracellular vesicular exosome
Orthologs
Species
Homo sapiens
Bos taurus
Gene ID
Gene Order
ENSG00000115756
View Gene Order
ENSBTAG00000004259
Not yet available
Cross-References
SwissProt P62748
TrEMBL
UniProt Splice Variant
Entrez Gene 53602
UniGene Mm.313619 Mm.489835
RefSeq NM_016677 XM_006515156 XM_006515157
OMIM
CCDS CCDS25830
HPRD
IMGT
MGI ID MGI:1855689
MGI Symbol Hpcal1
EMBL AF085192 BC001997
GenPept AAC35552 AAH01997
RNA Seq Atlas 53602

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca