Bos taurus Gene: HPCAL1
Summary
InnateDB Gene IDBG-638203.3
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol HPCAL1
Gene Name Hippocalcin-like protein 1
Synonyms
Species Bos taurus
Ensembl Gene ENSBTAG00000004259
Encoded Proteins
Hippocalcin-like protein 1
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000115756:
The protein encoded by this gene is a member of neuron-specific calcium-binding proteins family found in the retina and brain. It is highly similar to human hippocalcin protein and nearly identical to the rat and mouse hippocalcin like-1 proteins. It may be involved in the calcium-dependent regulation of rhodopsin phosphorylation and may be of relevance for neuronal signalling in the central nervous system. Several alternatively spliced transcript variants encoding the same protein have been found for this gene. [provided by RefSeq, Apr 2012]
Gene Information
Type Protein coding
Genomic Location Chromosome 11:87191215-87307998
Strand Reverse strand
Band
Transcripts
ENSBTAT00000005577 ENSBTAP00000005577
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 0 experimentally validated interaction(s) in this database.
They are also associated with 8 interaction(s) predicted by orthology.
Predicted by orthology
Total 8 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0005509 calcium ion binding
GO:0005515 protein binding
GO:0046872 metal ion binding
Biological Process
GO:0007165 signal transduction
Cellular Component
GO:0005578 proteinaceous extracellular matrix
GO:0070062 extracellular vesicular exosome
Orthologs
Species
Homo sapiens
Mus musculus
Gene ID
Gene Order
Method
Confidence
Comments
SSD Ortholog
Ortholog supports species divergence
SSD Ortholog
Ortholog supports species divergence
Cross-References
SwissProt P29105
TrEMBL
UniProt Splice Variant
Entrez Gene 513870
UniGene Bt.46470
RefSeq NM_001098964 XM_005193945 XM_005193946 XM_005193949 XM_005212969 XM_005212972
HUGO
OMIM
CCDS
HPRD
IMGT
EMBL BC142529
GenPept AAI42530
RNA Seq Atlas 101908883 513870
Transcript Frequencies
Tag Count based mRNA-Abundances across 87 different Tissues (TPM).

Based on Data from Bovine Gene Atlas

Tag Count based mRNA-Abundances across 87 different Tissues (TPM)

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