Homo sapiens Gene: HPCAL1
Summary
InnateDB Gene IDBG-28496.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol HPCAL1
Gene Name hippocalcin-like 1
Synonyms BDR1; HLP2; VILIP-3;
Species Homo sapiens
Ensembl Gene ENSG00000115756
Encoded Proteins
hippocalcin-like 1
hippocalcin-like 1
hippocalcin-like 1
hippocalcin-like 1
hippocalcin-like 1
hippocalcin-like 1
hippocalcin-like 1
hippocalcin-like 1
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary The protein encoded by this gene is a member of neuron-specific calcium-binding proteins family found in the retina and brain. It is highly similar to human hippocalcin protein and nearly identical to the rat and mouse hippocalcin like-1 proteins. It may be involved in the calcium-dependent regulation of rhodopsin phosphorylation and may be of relevance for neuronal signalling in the central nervous system. Several alternatively spliced transcript variants encoding the same protein have been found for this gene. [provided by RefSeq, Apr 2012]
Gene Information
Type Protein coding
Genomic Location Chromosome 2:10302889-10427617
Strand Forward strand
Band p25.1
Transcripts
ENST00000307845 ENSP00000310749
ENST00000381765 ENSP00000371184
ENST00000423674 ENSP00000413689
ENST00000419810 ENSP00000416359
ENST00000422133 ENSP00000388856
ENST00000620771 ENSP00000483786
ENST00000622018 ENSP00000482993
ENST00000613496 ENSP00000478231
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 8 experimentally validated interaction(s) in this database.
They are also associated with 3 interaction(s) predicted by orthology.
Experimentally validated
Total 8 [view]
Protein-Protein 8 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Predicted by orthology
Total 3 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0005509 calcium ion binding
GO:0005515 protein binding
Biological Process
GO:0007165 signal transduction
Cellular Component
GO:0005578 proteinaceous extracellular matrix
GO:0070062 extracellular vesicular exosome
Orthologs
Species
Mus musculus
Bos taurus
Gene ID
Gene Order
Method
Confidence
Comments
SSD Ortholog
Ortholog supports species divergence
Not yet available
SSD Ortholog
Ortholog supports species divergence
Cross-References
SwissProt
TrEMBL
UniProt Splice Variant
Entrez Gene
UniGene Hs.467696 Hs.580427
RefSeq NM_001258357 NM_001258358 NM_001258359 NM_002149 NM_134421 XM_005246160
HUGO
OMIM
CCDS CCDS1671
HPRD 02564
IMGT
EMBL
GenPept
RNA Seq Atlas