Version 5.4
Mus musculus Gene: Rbm10
Summary
InnateDB Gene IDBG-134728.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Rbm10
Gene Name RNA binding motif protein 10
Synonyms
Species Mus musculus
Ensembl Gene ENSMUSG00000031060
Encoded Proteins
IDBP-134730
RNA binding motif protein 10
IDBP-134732
RNA binding motif protein 10
IDBP-249769
RNA binding motif protein 10
IDBP-249766
RNA binding motif protein 10
IDBP-249768
RNA binding motif protein 10
IDBP-716159
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000182872:
This gene encodes a nuclear protein that belongs to a family proteins that contain an RNA-binding motif. The encoded protein associates with hnRNP proteins and may be involved in regulating alternative splicing. Defects in this gene are the cause of the X-linked recessive disorder, TARP syndrome. Alternate splicing results in multiple transcript variants.[provided by RefSeq, Mar 2011]
Gene Information
Type Protein coding
Genomic Location Chromosome X:20617503-20650901
Strand Forward strand
Band A1.3
Transcripts
ENSMUST00000064911 ENSMUSP00000068188
ENSMUST00000082089 ENSMUSP00000080738
ENSMUST00000084383 ENSMUSP00000111031
ENSMUST00000115375 ENSMUSP00000111033
ENSMUST00000115374 ENSMUSP00000111032
ENSMUST00000141128
ENSMUST00000177738 ENSMUSP00000136209
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 7 experimentally validated interaction(s) in this database.
They are also associated with 42 interaction(s) predicted by orthology.
Experimentally validated
Total 7 [view]
Protein-Protein 7 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Predicted by orthology
Total 42 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0000166 nucleotide binding
GO:0003676 nucleic acid binding
GO:0003723 RNA binding
GO:0005515 protein binding
GO:0008270 zinc ion binding
GO:0032403 protein complex binding
GO:0042802 identical protein binding
GO:0044822 poly(A) RNA binding
GO:0046872 metal ion binding
Biological Process
GO:0000122 negative regulation of transcription from RNA polymerase II promoter
GO:0008285 negative regulation of cell proliferation
GO:0034391 regulation of smooth muscle cell apoptotic process
GO:0034393 positive regulation of smooth muscle cell apoptotic process
GO:0070935 3'-UTR-mediated mRNA stabilization
Cellular Component
GO:0005634 nucleus
Orthologs
Species
Homo sapiens
Bos taurus
Gene ID
Gene Order
ENSG00000182872
View Gene Order
ENSBTAG00000002890
Not yet available
Cross-References
SwissProt
TrEMBL
UniProt Splice Variant
Entrez Gene
UniGene
RefSeq NM_001161816 NM_001167775 NM_001167776 NM_145627 XM_006527618 XM_006527619
OMIM
CCDS CCDS40885 CCDS53013 CCDS53014
HPRD
IMGT
MGI ID
MGI Symbol
EMBL
GenPept
RNA Seq Atlas

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca