Version 5.4
Mus musculus Gene: Whsc1l1
Summary
InnateDB Gene IDBG-143943.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Whsc1l1
Gene Name Wolf-Hirschhorn syndrome candidate 1-like 1 (human)
Synonyms
Species Mus musculus
Ensembl Gene ENSMUSG00000054823
Encoded Proteins
IDBP-143947
Wolf-Hirschhorn syndrome candidate 1-like 1 (human)
IDBP-535276
Wolf-Hirschhorn syndrome candidate 1-like 1 (human)
IDBP-539584
Wolf-Hirschhorn syndrome candidate 1-like 1 (human)
IDBP-538138
Wolf-Hirschhorn syndrome candidate 1-like 1 (human)
IDBP-539027
Wolf-Hirschhorn syndrome candidate 1-like 1 (human)
IDBP-535151
Wolf-Hirschhorn syndrome candidate 1-like 1 (human)
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000147548:
This gene is related to the Wolf-Hirschhorn syndrome candidate-1 gene and encodes a protein with PWWP (proline-tryptophan-tryptophan-proline) domains. The function of the protein has not been determined. Two alternatively spliced variants have been described. [provided by RefSeq, Jul 2008]
Gene Information
Type Protein coding
Genomic Location Chromosome 8:25601601-25719667
Strand Forward strand
Band A2
Transcripts
ENSMUST00000084026 ENSMUSP00000081040
ENSMUST00000155861 ENSMUSP00000117596
ENSMUST00000136107
ENSMUST00000146919 ENSMUSP00000115470
ENSMUST00000142395 ENSMUSP00000117778
ENSMUST00000139966 ENSMUSP00000122096
ENSMUST00000143445
ENSMUST00000141781
ENSMUST00000153597 ENSMUSP00000123028
ENSMUST00000129959
ENSMUST00000147935
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 10 experimentally validated interaction(s) in this database.
They are also associated with 5 interaction(s) predicted by orthology.
Experimentally validated
Total 10 [view]
Protein-Protein 4 [view]
Protein-DNA 6 [view]
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Predicted by orthology
Total 5 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0005515 protein binding
GO:0008270 zinc ion binding
GO:0018024 histone-lysine N-methyltransferase activity
Biological Process
GO:0006351 transcription, DNA-templated
GO:0006355 regulation of transcription, DNA-templated
GO:0034968 histone lysine methylation
Cellular Component
GO:0005634 nucleus
GO:0005694 chromosome
Orthologs
Species
Homo sapiens
Bos taurus
Gene ID
Gene Order
ENSG00000147548
View Gene Order
ENSBTAG00000001529
Not yet available
Pathways
NETPATH
REACTOME
KEGG
mmu00310
Lysine degradation pathway
INOH
PID NCI
Pathway Predictions based on Human Orthology Data
NETPATH
REACTOME
KEGG
hsa00310
Lysine degradation pathway
INOH
PID NCI
Cross-References
SwissProt
TrEMBL
UniProt Splice Variant
Entrez Gene
UniGene Mm.217337 Mm.397634 Mm.471017
RefSeq NM_001001735 NM_001081269 XM_006509100 XM_006509101
OMIM
CCDS CCDS40305 CCDS52528
HPRD
IMGT
MGI ID
MGI Symbol
EMBL
GenPept
RNA Seq Atlas

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca