Homo sapiens Gene: WHSC1L1
Summary
InnateDB Gene IDBG-17572.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol WHSC1L1
Gene Name Wolf-Hirschhorn syndrome candidate 1-like 1
Synonyms
Species Homo sapiens
Ensembl Gene ENSG00000147548
Encoded Proteins
Wolf-Hirschhorn syndrome candidate 1-like 1
Wolf-Hirschhorn syndrome candidate 1-like 1
Wolf-Hirschhorn syndrome candidate 1-like 1
Wolf-Hirschhorn syndrome candidate 1-like 1
Wolf-Hirschhorn syndrome candidate 1-like 1
Wolf-Hirschhorn syndrome candidate 1-like 1
Wolf-Hirschhorn syndrome candidate 1-like 1
Wolf-Hirschhorn syndrome candidate 1-like 1
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene is related to the Wolf-Hirschhorn syndrome candidate-1 gene and encodes a protein with PWWP (proline-tryptophan-tryptophan-proline) domains. The function of the protein has not been determined. Two alternatively spliced variants have been described. [provided by RefSeq, Jul 2008]
Gene Information
Type Protein coding
Genomic Location Chromosome 8:38269697-38382272
Strand Reverse strand
Band p11.23
Transcripts
ENST00000317025 ENSP00000313983
ENST00000316985 ENSP00000313410
ENST00000433384 ENSP00000393284
ENST00000528828
ENST00000527502 ENSP00000434730
ENST00000526050
ENST00000528304
ENST00000525081
ENST00000528627 ENSP00000435073
ENST00000529223 ENSP00000435422
ENST00000534155 ENSP00000432544
ENST00000534539 ENSP00000431598
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 36 experimentally validated interaction(s) in this database.
They are also associated with 1 interaction(s) predicted by orthology.
Experimentally validated
Total 36 [view]
Protein-Protein 36 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Predicted by orthology
Total 1 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0005515 protein binding
GO:0008270 zinc ion binding
GO:0018024 histone-lysine N-methyltransferase activity
Biological Process
GO:0006351 transcription, DNA-templated
GO:0006355 regulation of transcription, DNA-templated
GO:0016571 histone methylation
GO:0034968 histone lysine methylation
Cellular Component
GO:0005634 nucleus
GO:0005694 chromosome
Orthologs
Species
Mus musculus
Bos taurus
Gene ID
Gene Order
Method
Confidence
Comments
Non-SSD Ortholog
Possible paralog/unusual divergence/ gene prediction error
Not yet available
Non-SSD Ortholog
Possible paralog/unusual divergence/ gene prediction error
Pathways
NETPATH
REACTOME
KEGG
Lysine degradation pathway
INOH
PID BIOCARTA
PID NCI
Cross-References
SwissProt Q9BZ95
TrEMBL E9PKA2 E9PQ95
UniProt Splice Variant
Entrez Gene 54904
UniGene Hs.608111 Hs.722308
RefSeq NM_017778 NM_023034
HUGO HGNC:12767
OMIM 607083
CCDS CCDS43729 CCDS6105
HPRD 06155
IMGT
EMBL AC087362 AC087623 AF255649 AF332468 AF332469 AJ295990 AJ295991 AJ295992 AK000360 AK022560 AK127594 BC012059 BC062631 BC101717 BC107734 BC113469 BC115006 BC143510 CH471080
GenPept AAG44637 AAH12059 AAH62631 AAI01718 AAI07735 AAI13470 AAI15007 AAI43511 AAK00354 AAK00355 BAA91110 BAB14099 CAC28350 CAC28351 CAC28352 EAW63320 EAW63321
RNA Seq Atlas 54904