Version 5.4
Mus musculus Gene: Atl1
Summary
InnateDB Gene IDBG-145175.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Atl1
Gene Name atlastin GTPase 1
Synonyms 4930435M24Rik; Adfsp; Fsp1; Spg3; Spg3a
Species Mus musculus
Ensembl Gene ENSMUSG00000021066
Encoded Proteins
IDBP-145177
atlastin GTPase 1
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene encodes a member of the dynamin family of GTPases. The encoded protein interacts with tubule-shaping proteins of the endoplasmic reticulum. Mutations in the homologous human gene can cause hereditary spastic paraplegia. [provided by RefSeq, Feb 2010]
Gene Information
Type Protein coding
Genomic Location Chromosome 12:69893105-69964085
Strand Forward strand
Band C2
Transcripts
ENSMUST00000021466 ENSMUSP00000021466
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 1 experimentally validated interaction(s) in this database.
They are also associated with 3 interaction(s) predicted by orthology.
Experimentally validated
Total 1 [view]
Protein-Protein 1 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Predicted by orthology
Total 3 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0003924 GTPase activity
GO:0005515 protein binding
GO:0005525 GTP binding
GO:0042802 identical protein binding
Biological Process
GO:0006184 GTP catabolic process
GO:0007029 endoplasmic reticulum organization
GO:0007409 axonogenesis
GO:0051260 protein homooligomerization
Cellular Component
GO:0000137 Golgi cis cisterna
GO:0000139 Golgi membrane
GO:0005783 endoplasmic reticulum
GO:0005789 endoplasmic reticulum membrane
GO:0005794 Golgi apparatus
GO:0016021 integral component of membrane
GO:0030424 axon
Orthologs
Species
Homo sapiens
Bos taurus
Gene ID
Gene Order
ENSG00000198513
View Gene Order
ENSBTAG00000014312
Not yet available
Cross-References
SwissProt Q8BH66
TrEMBL
UniProt Splice Variant
Entrez Gene 73991
UniGene
RefSeq NM_178628
OMIM
CCDS CCDS36465
HPRD
IMGT
MGI ID MGI:1921241
MGI Symbol Atl1
EMBL AK046919 AK050339 AK083918 BC050784
GenPept AAH50784 BAC32920 BAC34198 BAC39062
RNA Seq Atlas 73991

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca