InnateDB: Systems Biology of the Innate Immune Response

Mus musculus Gene: Snrpd2

Summary

InnateDB Gene

IDBG-149635.6

Last Modified

2014-10-13 [Report errors or provide feedback]

Gene Symbol

Snrpd2

Gene Name

small nuclear ribonucleoprotein D2

Synonyms

1810009A06Rik; SMD2

Species

Mus musculus

Ensembl Gene

ENSMUSG00000040824

Encoded Proteins

IDBP-149637

small nuclear ribonucleoprotein D2

Protein Structure

Useful resources

Stemformatics EHFPI ImmGen

Entrez Gene

Summary

This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000125743:
The protein encoded by this gene belongs to the small nuclear ribonucleoprotein core protein family. It is required for pre-mRNA splicing and small nuclear ribonucleoprotein biogenesis. Multiple transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, May 2009]

Gene Information

Type

Protein coding

Genomic Location

Chromosome 7:19149722-19152735

Strand

Forward strand

Band

Transcripts

ENSMUST00000049294

ENSMUSP00000037597

Interactions

Number of Interactions

This gene and/or its encoded proteins are associated with 11 experimentally validated interaction(s) in this database.
They are also associated with 78 interaction(s) predicted by orthology.

Experimentally validated
Total	11 [view]
Protein-Protein	11 [view]
Protein-DNA	0
Protein-RNA	0
DNA-DNA	0
RNA-RNA	0
DNA-RNA	0

Predicted by orthology
Total	78 [view]

Gene Ontology

Molecular Function

Accession	GO Term
GO:0005515	protein binding
GO:0044822	poly(A) RNA binding

Biological Process

GO:0000387

spliceosomal snRNP assembly

Cellular Component

GO:0005681	spliceosomal complex
GO:0005685	U1 snRNP
GO:0005687	U4 snRNP
GO:0005689	U12-type spliceosomal complex
GO:0005829	cytosol
GO:0034709	methylosome
GO:0034715	pICln-Sm protein complex
GO:0034719	SMN-Sm protein complex
GO:0070062	extracellular vesicular exosome
GO:0071013	catalytic step 2 spliceosome