Version 5.4
Homo sapiens Gene: SPATA13
Summary
InnateDB Gene IDBG-15519.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol SPATA13
Gene Name spermatogenesis associated 13
Synonyms
Species Homo sapiens
Ensembl Gene ENSG00000182957
Encoded Proteins
IDBP-15425
spermatogenesis associated 13
IDBP-15523
spermatogenesis associated 13
IDBP-15525
spermatogenesis associated 13
IDBP-15527
spermatogenesis associated 13
IDBP-229395
spermatogenesis associated 13
IDBP-292485
spermatogenesis associated 13
IDBP-361819
spermatogenesis associated 13
IDBP-361823
spermatogenesis associated 13
IDBP-361826
spermatogenesis associated 13
IDBP-811965
spermatogenesis associated 13
IDBP-811970
spermatogenesis associated 13
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary Currently no Entrez Summary Available. You might want to check the Summary Sections of the Orthologs.
Gene Information
Type Protein coding
Genomic Location Chromosome 13:23979805-24307074
Strand Forward strand
Band q12.12
Transcripts
ENST00000382141 ENSP00000371576
ENST00000382108 ENSP00000371542
ENST00000382095 ENSP00000371527
ENST00000343003 ENSP00000343631
ENST00000399949 ENSP00000382830
ENST00000409126 ENSP00000386471
ENST00000424834 ENSP00000398560
ENST00000434675 ENSP00000401605
ENST00000454083 ENSP00000397498
ENST00000466831
ENST00000474317
ENST00000494772 ENSP00000477296
ENST00000488060 ENSP00000477304
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 1 experimentally validated interaction(s) in this database.
Experimentally validated
Total 1 [view]
Protein-Protein 1 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Gene Ontology

Molecular Function
Accession GO Term
GO:0005085 guanyl-nucleotide exchange factor activity
GO:0005089 Rho guanyl-nucleotide exchange factor activity
GO:0005515 protein binding
GO:0030676 Rac guanyl-nucleotide exchange factor activity
Biological Process
GO:0016477 cell migration
GO:0030032 lamellipodium assembly
GO:0030334 regulation of cell migration
GO:0032321 positive regulation of Rho GTPase activity
GO:0032855 positive regulation of Rac GTPase activity
GO:0035023 regulation of Rho protein signal transduction
GO:0043547 positive regulation of GTPase activity
GO:0046847 filopodium assembly
Cellular Component
GO:0005634 nucleus
GO:0005737 cytoplasm
GO:0030027 lamellipodium
GO:0030175 filopodium
GO:0032587 ruffle membrane
Orthologs
Species
Mus musculus
Gene ID
Gene Order
ENSMUSG00000021990
View Gene Order
Pathways
NETPATH
REACTOME
KEGG
INOH
PID NCI
rac1_reg_pathway
Regulation of RAC1 activity
cdc42_reg_pathway
Regulation of CDC42 activity
Cross-References
SwissProt
TrEMBL
UniProt Splice Variant
Entrez Gene
UniGene Hs.595391 Hs.618939 Hs.721173 Hs.735225
RefSeq NM_001166271 NM_001286792 NM_001286793 NM_001286794 NM_001286795 NM_153023
HUGO
OMIM
CCDS CCDS53857 CCDS66517 CCDS66518 CCDS73553 CCDS9305
HPRD 15427
IMGT
EMBL
GenPept
RNA Seq Atlas

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca