Version 5.4
Mus musculus Gene: Usp39
Summary
InnateDB Gene IDBG-156989.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Usp39
Gene Name ubiquitin specific peptidase 39
Synonyms AA408960; AI894154; CGI-21; D6Wsu157e; SAD1
Species Mus musculus
Ensembl Gene ENSMUSG00000056305
Encoded Proteins
IDBP-156991
ubiquitin specific peptidase 39
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000168883:
Gene Information
Type Protein coding
Genomic Location Chromosome 6:72318678-72345184
Strand Reverse strand
Band C1
Transcripts
ENSMUST00000070345 ENSMUSP00000064515
ENSMUST00000154799
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 7 experimentally validated interaction(s) in this database.
They are also associated with 66 interaction(s) predicted by orthology.
Experimentally validated
Total 7 [view]
Protein-Protein 7 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Predicted by orthology
Total 66 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0008270 zinc ion binding
GO:0036459 ubiquitinyl hydrolase activity
Biological Process
GO:0006397 mRNA processing
GO:0006511 ubiquitin-dependent protein catabolic process
GO:0007049 cell cycle
GO:0008380 RNA splicing
GO:0051301 cell division
Cellular Component
GO:0005681 spliceosomal complex
Orthologs
Species
Homo sapiens
Bos taurus
Gene ID
Gene Order
ENSG00000168883
View Gene Order
ENSBTAG00000010691
Not yet available
Pathways
NETPATH
REACTOME
KEGG
mmu03040
Spliceosome pathway
INOH
PID NCI
Pathway Predictions based on Human Orthology Data
NETPATH
REACTOME
KEGG
hsa03040
Spliceosome pathway
INOH
PID NCI
Cross-References
SwissProt
TrEMBL
UniProt Splice Variant
Entrez Gene
UniGene Mm.281900 Mm.474311
RefSeq NM_138592 XM_006506216
OMIM
CCDS CCDS20238
HPRD
IMGT
MGI ID
MGI Symbol
EMBL
GenPept
RNA Seq Atlas

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca